RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 MMP28Q9H239 520 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 TMEM133Q9H2Q1 129 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 NEK6Q9HC98 313 aa11.38□□□□□ -0.59
SHOX-202ENST00000381575 H3BNX3 289 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 MGST3O14880 152 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 ATP5HO75947 161 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 PRKACBP22694 351 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 GLIPR1P48060 266 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 P2RX3P56373 397 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 AESQ08117 197 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 KPNB1Q14974 876 aaKnown RBP11.37□□□□□ -0.59
SHOX-202ENST00000381575 ZNF146Q15072 292 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 SAMD5Q5TGI4 173 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 UTS2BQ765I0 119 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 ENTHD1Q8IYW4 607 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 Q8N2B8 174 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 C10orf35Q96D05 121 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 PELI1Q96FA3 418 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 HRASLS5Q96KN8 279 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 MBOAT4Q96T53 435 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 PRSS22Q9GZN4 317 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 EXOSC4Q9NPD3 245 aaKnown RBP11.37□□□□□ -0.59
SHOX-202ENST00000381575 ORC6Q9Y5N6 252 aa11.37□□□□□ -0.59
SHOX-202ENST00000381575 A0A1W2PRX2 142 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 OR4C45A6NMZ5 311 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 ADARB2-AS1A8MUL3 147 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 PEX14O75381 377 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 CDK2P24941 298 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 VDAC2P45880 294 aaPredicted RBP11.36□□□□□ -0.59
SHOX-202ENST00000381575 OXLD1Q5BKU9 147 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 UTF1Q5T230 341 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 LPCAT4Q643R3 524 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 LHFPL3Q86UP9 236 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 LGALS12Q96DT0 336 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 ISG20L2Q9H9L3 353 aaKnown RBP11.36□□□□□ -0.59
SHOX-202ENST00000381575 PITPNC1Q9UKF7 332 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 HHLA2Q9UM44 414 aa11.36□□□□□ -0.59
SHOX-202ENST00000381575 SH2D7A6NKC9 451 aaPredicted RBP11.35□□□□□ -0.59
SHOX-202ENST00000381575 HSPB6O14558 160 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 SH2D1BO14796 132 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 ISG15P05161 165 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 ZNF44P15621 663 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 SNRPGP62308 76 aaKnown RBP11.35□□□□□ -0.59
SHOX-202ENST00000381575 ALKBH1Q13686 389 aaKnown RBP11.35□□□□□ -0.59
SHOX-202ENST00000381575 ATXN7L3Q14CW9 347 aaPredicted RBP11.35□□□□□ -0.59
SHOX-202ENST00000381575 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 MINOS1Q5TGZ0 78 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 FDX2Q6P4F2 183 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 CBR4Q8N4T8 237 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 ACBD7Q8N6N7 88 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
SHOX-202ENST00000381575 TRUB1Q8WWH5 349 aaKnown RBP11.35□□□□□ -0.59
SHOX-202ENST00000381575 SPSB1Q96BD6 273 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 ALG8Q9BVK2 526 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 ZNF286AQ9HBT8 521 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 AMBNQ9NP70 447 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 GLS2Q9UI32 602 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 MYRFQ9Y2G1 1151 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 MINOS1-NBL1R4GNA1 71 aa11.35□□□□□ -0.59
SHOX-202ENST00000381575 TRGV10A0A0A0MS01 117 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 E9PI62 339 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 E9PQ18 207 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 KDM4BO94953 1096 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 HCKP08631 526 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 HTR1DP28221 377 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 ALDH3A2P51648 485 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 DYNLT3P51808 116 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 IL18R1Q13478 541 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 KCTD20Q7Z5Y7 419 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 COQ2Q96H96 371 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 WNT10AQ9GZT5 417 aa11.34□□□□□ -0.59
SHOX-202ENST00000381575 PPIL3Q9H2H8 161 aaKnown RBP11.34□□□□□ -0.59
SHOX-202ENST00000381575 SEBOXQ9HB31 216 aaPredicted RBP11.34□□□□□ -0.59
SHOX-202ENST00000381575 EXOGQ9Y2C4 368 aaKnown RBP11.34□□□□□ -0.59
SHOX-202ENST00000381575 UBE2J1Q9Y385 318 aaPredicted RBP11.34□□□□□ -0.59
SHOX-202ENST00000381575 ODAMA1E959 279 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 SLC33A1O00400 549 aaPredicted RBP11.33□□□□□ -0.6
SHOX-202ENST00000381575 DBTP11182 482 aaKnown RBP11.33□□□□□ -0.6
SHOX-202ENST00000381575 ERP29P30040 261 aaKnown RBP11.33□□□□□ -0.6
SHOX-202ENST00000381575 CCR9P51686 369 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 RBM39Q14498 530 aaKnown RBP11.33□□□□□ -0.6
SHOX-202ENST00000381575 SLC25A30Q5SVS4 291 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 KPRPQ5T749 579 aaPredicted RBP11.33□□□□□ -0.6
SHOX-202ENST00000381575 MEDAGQ5VYS4 303 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 Q6P435 159 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 NDUFA11Q86Y39 141 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 NR1H4Q96RI1 486 aaPredicted RBP11.33□□□□□ -0.6
SHOX-202ENST00000381575 PDCD1LG2Q9BQ51 273 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 COMMD4Q9H0A8 199 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 ZCCHC4Q9H5U6 513 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 GMPPBQ9Y5P6 360 aa11.33□□□□□ -0.6
SHOX-202ENST00000381575 IGHV3-7P01780 117 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms