RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ELAVL3Q14576 367 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 FAM189A2Q15884 450 aa16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 TMEM183BQ1AE95 376 aa16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 CT45A2Q5DJT8 189 aa16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 DPPA3Q6W0C5 159 aa16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 NUP54Q7Z3B4 507 aa16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 OR51G1Q8NGK1 321 aa16.59■□□□□ 0.25
SMARCD1-201ENST00000381513 PDLIM4P50479 330 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 ZNF154Q13106 437 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 TMEM41BQ5BJD5 291 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 ZNF558Q96NG5 402 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 CCDC3Q9BQI4 270 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 TXNIPQ9H3M7 391 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 Q9N2K0 584 aa16.58■□□□□ 0.25
SMARCD1-201ENST00000381513 NKX2-6A6NCS4 301 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 MSTNO14793 375 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 TMEM52BQ4KMG9 183 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 VHLLQ6RSH7 139 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 CA13Q8N1Q1 262 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 OR2T10Q8NGZ9 312 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 SLAMF6Q96DU3 332 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 GLRX2Q9NS18 164 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 HCFC2Q9Y5Z7 792 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 LRRK1Q38SD2 2015 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 PRRT4C9JH25 899 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 NXPH2O95156 264 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 TMEM241Q24JQ0 296 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 TCTN1Q2MV58 587 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 C1QL2Q7Z5L3 287 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 PRR22Q8IZ63 422 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 C1orf147Q96MC9 270 aaPredicted RBP16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 OR51I2Q9H344 312 aa16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 MCTS1Q9ULC4 181 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-201ENST00000381513 MAP1LC3B2A6NCE7 125 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 HLA-DOBP13765 273 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 SEC13P55735 322 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 IL24Q13007 206 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 CAPNS2Q96L46 248 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 TECTBQ96PL2 329 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 MAP1LC3BQ9GZQ8 125 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 SLC2A9Q9NRM0 540 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 FBLN5Q9UBX5 448 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 DNAH14Q0VDD8 3507 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 A0A1W2PNV4 684 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 H3BP45 60 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 ETV2O00321 342 aaPredicted RBP16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 TNFSF13O75888 250 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 TESK1Q15569 626 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 HNRNPA1L2Q32P51 320 aaKnown RBP16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 TGIF2LYQ8IUE0 185 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 OR5AS1Q8N127 324 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 CISD1Q9NZ45 108 aaKnown RBP16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 THAP10Q9P2Z0 257 aaPredicted RBP16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 RNF150Q9ULK6 438 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 TRDCB7Z8K6 153 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 CDKN1BP46527 198 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 ADPRHL1Q8NDY3 354 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 OIT3Q8WWZ8 545 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 FAM206AQ9NX38 181 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 NAT8Q9UHE5 227 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 RNF24Q9Y225 148 aa16.57■□□□□ 0.24
SMARCD1-201ENST00000381513 NUPR1O60356 82 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 ZFYVE21Q9BQ24 234 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 LIME1Q9H400 295 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 TRAV36DV7A0A075B6V5 113 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 TRAV34A0A0B4J273 112 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 OR5G3P0C626 314 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 DEFB128Q7Z7B8 93 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 ZNF709Q8N972 641 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 ZNF519Q8TB69 540 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 ALKBH3Q96Q83 286 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 ZPBPQ9BS86 351 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 ALKBH7Q9BT30 221 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 MSL2Q9HCI7 577 aa16.56■□□□□ 0.24
SMARCD1-201ENST00000381513 PROB1E7EW31 1015 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 IFNA5P01569 189 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 CXorf66Q5JRM2 361 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 Q6ZVH6 145 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 MRPL52Q86TS9 123 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 C9orf40Q8IXQ3 194 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 OR10G4Q8NGN3 311 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 FAM3CQ92520 227 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 DGAT2Q96PD7 388 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 PCED1AQ9H1Q7 454 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 ANXA10Q9UJ72 324 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 TRAPPC1Q9Y5R8 145 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 SHANK1Q9Y566 2161 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 ASCC3Q8N3C0 2202 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 EDDM13A0A1B0GTR0 161 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 LRRC3CA6NJW4 275 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 SERPINE3A8MV23 424 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 ZNF732B4DXR9 585 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 HRASP01112 189 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 IGHEP01854 428 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 DEFB110Q30KQ9 67 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 GRINAQ7Z429 371 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 SLC38A9Q8NBW4 561 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 TM4SF19Q96DZ7 209 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 RSG1Q9BU20 258 aa16.55■□□□□ 0.24
SMARCD1-201ENST00000381513 RPRMQ9NS64 109 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms