RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 TRAV38-1A0A0B4J264 116 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 OOEPA6NGQ2 149 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 PPIAL4DF5H284 164 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 LGALS8O00214 317 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 CA11O75493 328 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 OR2H2O95918 312 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 PPIAL4FP0DN26 164 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 CD80P33681 288 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 MRPS15P82914 257 aaKnown RBP17.16■□□□□ 0.34
TSSC4-203ENST00000380996 RBM39Q14498 530 aaKnown RBP17.16■□□□□ 0.34
TSSC4-203ENST00000380996 TEX36Q5VZQ5 186 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 TRIQKQ629K1 86 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 SFRP4Q6FHJ7 346 aaPredicted RBP17.16■□□□□ 0.34
TSSC4-203ENST00000380996 ST8SIA4Q92187 359 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 THAP7Q9BT49 309 aaPredicted RBP17.16■□□□□ 0.34
TSSC4-203ENST00000380996 ZNF581Q9P0T4 197 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 KCNK7Q9Y2U2 307 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 PPIAL4AQ9Y536 164 aa17.16■□□□□ 0.34
TSSC4-203ENST00000380996 CACNA1DQ01668 2161 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 UPK1BO75841 260 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 F12P00748 615 aaPredicted RBP17.15■□□□□ 0.34
TSSC4-203ENST00000380996 LPLP06858 475 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 PSG2P11465 335 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 PTHLHP12272 177 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 DAOP14920 347 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 PRDX2P32119 198 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 EFNA4P52798 201 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 DGCR2P98153 550 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 HOXA4Q00056 320 aaPredicted RBP17.15■□□□□ 0.34
TSSC4-203ENST00000380996 ARFRP1Q13795 201 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 PEG10Q86TG7 708 aaKnown RBP17.15■□□□□ 0.34
TSSC4-203ENST00000380996 SUMF2Q8NBJ7 301 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 IGFBPL1Q8WX77 278 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 FAAP24Q9BTP7 215 aa17.15■□□□□ 0.34
TSSC4-203ENST00000380996 RAI1Q7Z5J4 1906 aaPredicted RBP17.14■□□□□ 0.34
TSSC4-203ENST00000380996 IGHV3OR15-7A0A075B7D8 119 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 SIRPB1O00241 398 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 CSF3P09919 207 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 COL8A2P25067 703 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 LMO1P25800 156 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 INPP1P49441 399 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 KCNJ8Q15842 424 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 BAK1Q16611 211 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 FAM201AQ5SY85 155 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 DNM1P46Q6ZS02 220 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 OR5T2Q8NGG2 359 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 OR52I2Q8NH67 350 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 NEK7Q8TDX7 302 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 GPX8Q8TED1 209 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 ZFAND2BQ8WV99 257 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 GCDHQ92947 438 aaPredicted RBP17.14■□□□□ 0.33
TSSC4-203ENST00000380996 SULT4A1Q9BR01 284 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 DPCDQ9BVM2 203 aaPredicted RBP17.14■□□□□ 0.33
TSSC4-203ENST00000380996 ABCB10Q9NRK6 738 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 DCAF16Q9NXF7 216 aa17.14■□□□□ 0.33
TSSC4-203ENST00000380996 TRAV24A0A0B4J272 114 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 RBBP9O75884 186 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 CD3GP09693 182 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 IL7P13232 177 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 RBMXP38159 391 aaKnown RBP17.13■□□□□ 0.33
TSSC4-203ENST00000380996 GABRA2P47869 451 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 PAN3Q58A45 887 aaKnown RBP17.13■□□□□ 0.33
TSSC4-203ENST00000380996 RNASE12Q5GAN4 147 aaKnown RBP17.13■□□□□ 0.33
TSSC4-203ENST00000380996 C19orf18Q8NEA5 215 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 DEFB108BQ8NET1 73 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 ANGPTL6Q8NI99 470 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 YIPF5Q969M3 257 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 MARVELD3Q96A59 401 aa17.13■□□□□ 0.33
TSSC4-203ENST00000380996 USP9YO00507 2555 aaPredicted RBP17.13■□□□□ 0.33
TSSC4-203ENST00000380996 CHD3Q12873 2000 aaKnown RBP17.13■□□□□ 0.33
TSSC4-203ENST00000380996 IGKV1D-17A0A075B6S4 117 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 UBE2QL1A1L167 161 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 MEIOCA2RUB1 952 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 SLC33A1O00400 549 aaPredicted RBP17.12■□□□□ 0.33
TSSC4-203ENST00000380996 RP2O75695 350 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 ZNF205O95201 554 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 FSTL3O95633 263 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 CBX5P45973 191 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 SSBP1Q04837 148 aaKnown RBP17.12■□□□□ 0.33
TSSC4-203ENST00000380996 OLFML2AQ68BL7 652 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 BRICD5Q6PL45 260 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 RTN4RL2Q86UN3 420 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 PPP1R35Q8TAP8 253 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 NUDCD2Q8WVJ2 157 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 CMSS1Q9BQ75 279 aaKnown RBP17.12■□□□□ 0.33
TSSC4-203ENST00000380996 AK3Q9UIJ7 227 aa17.12■□□□□ 0.33
TSSC4-203ENST00000380996 ELF5Q9UKW6 265 aaPredicted RBP17.12■□□□□ 0.33
TSSC4-203ENST00000380996 HRNRQ86YZ3 2850 aaPredicted RBP17.12■□□□□ 0.33
TSSC4-203ENST00000380996 LYNX1G3V0Z9 82 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 GSTT2BP0CG30 244 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 LYNX1P0DP58 116 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 MDH2P40926 338 aaKnown RBP17.11■□□□□ 0.33
TSSC4-203ENST00000380996 CEBPDP49716 269 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-203ENST00000380996 ACTBP60709 375 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 ACTG1P63261 375 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 GUCA2AQ02747 115 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 COL10A1Q03692 680 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 STUMQ69YW2 141 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 ZNF787Q6DD87 383 aa17.11■□□□□ 0.33
TSSC4-203ENST00000380996 TRAPPC6BQ86SZ2 158 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms