RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TMEM218A2RU14 115 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 OR2A25A4D2G3 310 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 SLC17A2O00624 439 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 OR5AC1P0C628 307 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 ZNF26P17031 533 aaPredicted RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 KISS1Q15726 138 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 PRSS41Q7RTY9 318 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 APOBEC4Q8WW27 367 aaKnown RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 TINAGQ9UJW2 476 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 RAXQ9Y2V3 346 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 ADRA2AP08913 450 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 GABRB1P18505 474 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 KIR3DL2P43630 455 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 ACER3Q9NUN7 267 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 FKBP11Q9NYL4 201 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 SLC45A2Q9UMX9 530 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 SS18L1O75177 396 aaPredicted RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 GABRG2P18507 467 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 GSCP56915 257 aaPredicted RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 ARHGEF28Q8N1W1 1705 aaKnown RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 PATE3B3GLJ2 98 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 NUBP1P53384 320 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 RNPS1Q15287 305 aaKnown RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 RTL10Q7L3V2 364 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 CMC2Q9NRP2 79 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 HSF4Q9ULV5 492 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 HDGFL3Q9Y3E1 203 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 PYCARD-AS1I3L0S3 204 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 FUT7Q11130 342 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 SIGIRRQ6IA17 410 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 RTN4RL1Q86UN2 441 aaPredicted RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 IGKV3D-20A0A0C4DH25 116 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 PRSS44E7EML9 344 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 HOXC4P09017 264 aaPredicted RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 CSF2RBP32927 897 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 PGFP49763 221 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 EMC4Q5J8M3 183 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 SH2D2AQ9NP31 389 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 RP1P56715 2156 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 CDIPTO14735 213 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 CCR2P41597 374 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 CCL8P80075 99 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 CYS1Q717R9 158 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 SPEM1Q8N4L4 309 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 ADAMTS17Q8TE56 1095 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 UQCC2Q9BRT2 126 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 KLF7O75840 302 aaPredicted RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 PNLIPP16233 465 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 GPR3P46089 330 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 TOMM34Q15785 309 aaPredicted RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 MAP6Q96JE9 813 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 MFSD2BA6NFX1 497 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 IGHV4-34P06331 123 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 WDR88Q6ZMY6 472 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 NUFIP2Q7Z417 695 aaKnown RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 FAM24BQ8N5W8 94 aa11.03□□□□□ -0.64
CHD3-203ENST00000380358 FAM208AQ9UK61 1670 aaKnown RBP11.03□□□□□ -0.64
CHD3-203ENST00000380358 IZUMO4Q1ZYL8 232 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 FAM26EQ8N5C1 309 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 PLEKHA2Q9HB19 425 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 IGHV3-23P01764 117 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 CMPK2Q5EBM0 449 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 OR4A47Q6IF82 309 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.64
CHD3-203ENST00000380358 GVQW1Q8N7I0 195 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 TMEM38AQ9H6F2 299 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 CLN8Q9UBY8 286 aa11.02□□□□□ -0.64
CHD3-203ENST00000380358 MAP1LC3B2A6NCE7 125 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 LIMS3P0CW19 117 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 LIMS4P0CW20 117 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 CD96P40200 585 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 ANKRD37Q7Z713 158 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 ZNF485Q8NCK3 441 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 SNRNP40Q96DI7 357 aaKnown RBP11.02□□□□□ -0.65
CHD3-203ENST00000380358 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
CHD3-203ENST00000380358 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 TRAV8-7A0A075B6U6 113 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 CLDN18P56856 261 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 PSG6Q00889 435 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 TPRX1Q8N7U7 411 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 IFITM5A6NNB3 132 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 ZNF25P17030 456 aaPredicted RBP11.02□□□□□ -0.65
CHD3-203ENST00000380358 ZBTB37Q5TC79 503 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 HARBI1Q96MB7 349 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 AESQ08117 197 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 SSPNQ14714 243 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 SH2D5Q6ZV89 423 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 TMED3Q9Y3Q3 217 aa11.02□□□□□ -0.65
CHD3-203ENST00000380358 MRPS18BQ9Y676 258 aaKnown RBP11.02□□□□□ -0.65
CHD3-203ENST00000380358 COL3A1P02461 1466 aaPredicted RBP11.02□□□□□ -0.65
CHD3-203ENST00000380358 A0A1B0GV72 72 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 FAM157CP0CG43 387 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 FOXL2P58012 376 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 GUK1Q16774 197 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms