RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 H3BQ15 152 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 ISG15P05161 165 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 MAS1LP35410 378 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 QRFPP83859 136 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 SLC10A1Q14973 349 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 HAGHQ16775 308 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 MCTS1Q9ULC4 181 aaKnown RBP10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 NUP210LQ5VU65 1888 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 ANKUB1A6NFN9 424 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 SFT2D2O95562 160 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 HPNP05981 417 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 PHYHD1Q5SRE7 291 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 ANKRD37Q7Z713 158 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 C17orf78Q8N4C9 275 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 LYPD6BQ8NI32 183 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 ZNF501Q96CX3 271 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 R4GN57 208 aa10.88□□□□□ -0.67
PRPF40B-202ENST00000380281 A0A1W2PQD3 144 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 PGA3P0DJD8 388 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 PTGER4P35408 488 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 THBS4P35443 961 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 APOBEC1P41238 236 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 MTCP1P56278 107 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 GUSBP11Q6P575 273 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 POC1BQ8TC44 478 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 SLC26A1Q9H2B4 701 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 C19orf12Q9NSK7 152 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 A0A1W2PR77 199 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 HSPB2A8KAH6 182 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 DLK1P80370 383 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 HSPB2Q16082 182 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 PEG10Q86TG7 708 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 SULF2Q8IWU5 870 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 OR5R1Q8NH85 324 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 FAM213BQ8TBF2 198 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 B3GALT5Q9Y2C3 310 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 CNOT1A5YKK6 2376 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 EP300Q09472 2414 aaPredicted RBP10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 JTBO76095 146 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 FOSL2P15408 326 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 CEACAM6P40199 344 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 CCL20P78556 96 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 SMRP1Q8NCR6 262 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 NOXO1Q8NFA2 376 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 OR11L1Q8NGX0 322 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 M1APQ8TC57 530 aa10.87□□□□□ -0.67
PRPF40B-202ENST00000380281 TRAF3IP2O43734 574 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 IFI6P09912 130 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 ZNF708P17019 499 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 JOSD1Q15040 202 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 AADACL3Q5VUY0 350 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 C1orf147Q96MC9 270 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 ALKBH4Q9NXW9 302 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 IGHV3-64DA0A0J9YX35 117 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 DLEU1O43261 78 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 LCATP04180 440 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 RAB4AP20338 218 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 TLE1Q04724 770 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 TRA2AQ13595 282 aaKnown RBP eCLIP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 SNAI3Q3KNW1 292 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 COL13A1Q5TAT6 717 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 FAHD2BQ6P2I3 314 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 LYPD6Q86Y78 171 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 FNDC9Q8TBE3 224 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 ST8SIA1Q92185 356 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 FAHD2AQ96GK7 314 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 C2orf50Q96LR7 162 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 NOL4LQ96MY1 436 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 ALKBH3Q96Q83 286 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 LUZP4Q9P127 313 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 MYOTQ9UBF9 498 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 TMED3Q9Y3Q3 217 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 ROS1P08922 2347 aa10.86□□□□□ -0.67
PRPF40B-202ENST00000380281 CCDC187A0A096LP49 1063 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 LOC400499M0QZD8 3231 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 TAAR5O14804 337 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 CHRM2P08172 466 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 OR4A8P0C604 315 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 CSNK1A1P48729 337 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 SLC35A1P78382 337 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 PLPPR5Q32ZL2 321 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 ABCA11PQ4W5N1 156 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 LYZL2Q7Z4W2 148 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 DTWD2Q8NBA8 298 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 POC1AQ8NBT0 407 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 LYZL4Q96KX0 146 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 PECRQ9BY49 303 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 RAB18Q9NP72 206 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 HSF4Q9ULV5 492 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 CHD3Q12873 2000 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 NPIPA2E9PIF3 369 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 NPIPA3F8WFD2 350 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 IFNL4K9M1U5 179 aa10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 TOX3O15405 576 aaPredicted RBP10.85□□□□□ -0.67
PRPF40B-202ENST00000380281 DANCRP0C864 163 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms