RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ATP6V1E1P36543 226 aa18.44■□□□□ 0.54
U2AF1-202ENST00000380276 OR3A1P47881 315 aa18.44■□□□□ 0.54
U2AF1-202ENST00000380276 RBP2P50120 134 aa18.44■□□□□ 0.54
U2AF1-202ENST00000380276 KRTAP10-11P60412 298 aa18.44■□□□□ 0.54
U2AF1-202ENST00000380276 KPNB1Q14974 876 aaKnown RBP18.44■□□□□ 0.54
U2AF1-202ENST00000380276 RTN4RL2Q86UN3 420 aa18.44■□□□□ 0.54
U2AF1-202ENST00000380276 ZNF649Q9BS31 505 aa18.44■□□□□ 0.54
U2AF1-202ENST00000380276 EXOSC4Q9NPD3 245 aaKnown RBP18.44■□□□□ 0.54
U2AF1-202ENST00000380276 OR2F2O95006 317 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 MTCP1P56278 107 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 CD69Q07108 199 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 SCN1BQ07699 218 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 RBM39Q14498 530 aaKnown RBP18.43■□□□□ 0.54
U2AF1-202ENST00000380276 C12orf73Q69YU5 71 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 FAM220AQ7Z4H9 259 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 CCDC54Q8NEL0 328 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 RFT1Q96AA3 541 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 RBM14Q96PK6 669 aaKnown RBP18.43■□□□□ 0.54
U2AF1-202ENST00000380276 INPP5EQ9NRR6 644 aa18.43■□□□□ 0.54
U2AF1-202ENST00000380276 TCRBV3S1A0A5B6 114 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 FUOMA2VDF0 154 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 ZAR1LA6NP61 321 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 E9PQ18 207 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 GYG2O15488 501 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 ZNF20P17024 532 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 EPHA2P29317 976 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 ERP29P30040 261 aaKnown RBP18.42■□□□□ 0.54
U2AF1-202ENST00000380276 CEACAM3P40198 252 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 BDH1Q02338 343 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 SPIN3Q5JUX0 258 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 RDH10Q8IZV5 341 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 PP6455Q8WZ26 134 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 WARS2Q9UGM6 360 aaKnown RBP18.42■□□□□ 0.54
U2AF1-202ENST00000380276 GNG8Q9UK08 70 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 PCDHGB5Q9Y5G0 923 aa18.42■□□□□ 0.54
U2AF1-202ENST00000380276 SH2D1BO14796 132 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 OR2T7P0C7T2 308 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 UBCP0CG48 685 aaKnown RBP18.41■□□□□ 0.54
U2AF1-202ENST00000380276 VSIG8P0DPA2 414 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 ZNF44P15621 663 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 MNDAP41218 407 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 OR3A4PP47883 348 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 AESQ08117 197 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 ZNF146Q15072 292 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 DNAL1Q4LDG9 190 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 PRSS35Q8N3Z0 413 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 SEBOXQ9HB31 216 aaPredicted RBP18.41■□□□□ 0.54
U2AF1-202ENST00000380276 ZNF286AQ9HBT8 521 aa18.41■□□□□ 0.54
U2AF1-202ENST00000380276 OR2H2O95918 312 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 PRKACBP22694 351 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 GDNFP39905 211 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 PTGFRP43088 359 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 GLIPR1P48060 266 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 CDC42P60953 191 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 TP53I3Q53FA7 332 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 TPTE2P1Q5T6R2 138 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 HEPN1Q6WQI6 88 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 LHFPL2Q6ZUX7 228 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 DNAAF1Q8NEP3 725 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 OR4D6Q8NGJ1 314 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 C10orf35Q96D05 121 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 ADAT3Q96EY9 351 aaPredicted RBP18.4■□□□□ 0.54
U2AF1-202ENST00000380276 GPR61Q9BZJ8 451 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 NEK6Q9HC98 313 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 POMPQ9Y244 141 aa18.4■□□□□ 0.54
U2AF1-202ENST00000380276 PSMB11A5LHX3 300 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 G3V2T6 193 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 SULT1C4O75897 302 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 ATF1P18846 271 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 NFYBP25208 207 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 HTR1FP30939 366 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 PRRX1P54821 245 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 EFNB1P98172 346 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 HLA-DRB5Q30154 266 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 OR51D1Q8NGF3 324 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 CREB3L1Q96BA8 519 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 FGGYQ96C11 551 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 HMG20AQ9NP66 347 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 TAS2R3Q9NYW6 316 aa18.39■□□□□ 0.53
U2AF1-202ENST00000380276 IGKV1-9A0A0C4DH69 117 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 BUB1B-PAK6H3BSN5 160 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 KIR3DL2P43630 455 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 KRBOX4Q5JUW0 171 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 CCDC144NLQ6NUI1 221 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 ZNF329Q86UD4 541 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 OSR2Q8N2R0 312 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 LINC00482Q8N8I6 264 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 OR5D18Q8NGL1 313 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 UTP4Q969X6 686 aaKnown RBP18.38■□□□□ 0.53
U2AF1-202ENST00000380276 OPALINQ96PE5 141 aa18.38■□□□□ 0.53
U2AF1-202ENST00000380276 KMT2CQ8NEZ4 4911 aaKnown RBP18.38■□□□□ 0.53
U2AF1-202ENST00000380276 NUDT19A8MXV4 375 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 M0QZK8 103 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 IGLV1-47P01700 117 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 AMY1AP04745 511 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 AMY2AP04746 511 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 CCDC159P0C7I6 412 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 PDZK1IP1Q13113 114 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 ATXN7L3Q14CW9 347 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-202ENST00000380276 TMEM244Q5VVB8 128 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms