RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 FKBP1AP62942 108 aaKnown RBP7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 ZNF684Q5T5D7 378 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 C1QL3Q5VWW1 255 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 PARS2Q7L3T8 475 aaKnown RBP7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 ATG4DQ86TL0 474 aaPredicted RBP7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 OR4D6Q8NGJ1 314 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 OR13G1Q8NGZ3 307 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 MTHFD2LQ9H903 347 aaPredicted RBP7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 LHX3Q9UBR4 397 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 VDAC3Q9Y277 283 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 WASHC3Q9Y3C0 194 aa7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 MRPS16Q9Y3D3 137 aaKnown RBP7.45□□□□□ -1.22
NHLRC3-201ENST00000379599 ZNF831Q5JPB2 1677 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 FEZF1A0PJY2 475 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 IGLON5A6NGN9 336 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 GALR2O43603 387 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TSPAN6O43657 245 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 HPNP05981 417 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 SFTPDP35247 375 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CTRLP40313 264 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 EWSR1Q01844 656 aaKnown RBP eCLIP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 MFGE8Q08431 387 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TCTN1Q2MV58 587 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 ZNF787Q6DD87 383 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TCF23Q7RTU1 214 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 SLC16A11Q8NCK7 471 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 FAM222BQ8WU58 562 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 SLC35A4Q96G79 324 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 C4orf45Q96LM5 186 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TUBD1Q9UJT1 453 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 IGLC7A0M8Q6 106 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 ST8SIA3O43173 380 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 ERI3O43414 337 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 HAND1O96004 215 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 C8AP07357 584 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 ESDP10768 282 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CRISP2P16562 243 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 IL3RAP26951 378 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CDKN2AP42771 156 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TM4SF4P48230 202 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 RAC3P60763 192 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CSNK2A1P68400 391 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 SRPXP78539 464 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 PRDX4Q13162 271 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 EIPR1Q53HC9 387 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 MRPL2Q5T653 305 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 PTCRAQ6ISU1 281 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 LGI3Q8N145 548 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CSNK2A3Q8NEV1 391 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 FBXO22Q8NEZ5 403 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 OR1B1Q8NGR6 318 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 DOK4Q8TEW6 326 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 C11orf40Q8WZ69 217 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 WBP2Q969T9 261 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 RBM24Q9BX46 236 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CDC42EP3Q9UKI2 254 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 PLXNB3Q9ULL4 1909 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 H7C1C5 153 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TIMP1P01033 207 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 ADMP35318 185 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 LCN6P62502 163 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 TMEM267Q0VDI3 215 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CDCP2Q5VXM1 449 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 OR10G4Q8NGN3 311 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CXorf40AQ8TE69 158 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 SCAMP4Q969E2 229 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 ELOVL3Q9HB03 270 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 FBXO34Q9NWN3 711 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 GTF3C1Q12789 2109 aa7.44□□□□□ -1.22
NHLRC3-201ENST00000379599 CST7O76096 145 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 HLA-DQA2P01906 255 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 PPIAL4GP0DN37 164 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 FBLP22087 321 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 CCR2P41597 374 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 PSG9Q00887 426 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 DUSP2Q05923 314 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 TAF10Q12962 218 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 LRRC10Q5BKY1 277 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 SPRYD7Q5W111 196 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 ZNF765Q7L2R6 523 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 VASH2Q86V25 355 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 SULF2Q8IWU5 870 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 SLC38A9Q8NBW4 561 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 EMG1Q92979 244 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 CAPNS2Q96L46 248 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 FOXN4Q96NZ1 517 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 RSG1Q9BU20 258 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 CISD1Q9NZ45 108 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 RBPJLQ9UBG7 517 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 SMPXQ9UHP9 88 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 RNF114Q9Y508 228 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 HEATR5BQ9P2D3 2071 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 TAX1BP3O14907 124 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 NPIPB7O75200 414 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 RBMXL2O75526 392 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 HLA-HP01893 362 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 PMCHP20382 165 aa7.43□□□□□ -1.22
NHLRC3-201ENST00000379599 EMP2P54851 167 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms