RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SERGEFQ9UGK8 458 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 ABCA3Q99758 1704 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 TBX19O60806 448 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 DHRS3O75911 302 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 GPR3P46089 330 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 YAE1D1Q9NRH1 226 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 CCDC88CQ9P219 2028 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 PLPP3O14495 311 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF774Q6NX45 483 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 ACSM6Q6P461 480 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 C16orf47Q6ZP98 133 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 GPR87Q9BY21 358 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 TAAR3PQ9P1P4 343 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 ERRFI1Q9UJM3 462 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SNRNP200O75643 2136 aaKnown RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 HLA-DRB3P79483 266 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 IL13RA2Q14627 380 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SMIM21Q3B7S5 101 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 OR4C3Q8NH37 302 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SLC25A22Q9H936 323 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 LYRM2Q9NU23 88 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 M0R1X1 148 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 FCN1O00602 326 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 FFAR1O14842 300 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 TMEM33P57088 247 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 FAM3AP98173 230 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 APOBEC3DQ96AK3 386 aaPredicted RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 SLC26A1Q9H2B4 701 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 MRM2Q9UI43 246 aaKnown RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 PPIL1Q9Y3C6 166 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 LIPGQ9Y5X9 500 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 COTL1Q14019 142 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 TIPARPQ7Z3E1 657 aaKnown RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF441Q8N8Z8 693 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 PACRGQ96M98 296 aaPredicted RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 GNRHR2Q96P88 292 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 HES4Q9HCC6 221 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 PRR19A6NJB7 356 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 ADAP1O75689 374 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 CELA2BP08218 269 aaPredicted RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 LY6DQ14210 128 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 MOGAT1Q96PD6 335 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 RNASE1P07998 156 aaKnown RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 ANKRD37Q7Z713 158 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 TGIF2LXQ8IUE1 241 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 NUBPLQ8TB37 319 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 WDR34Q96EX3 536 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 CA6P23280 308 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 GNG4P50150 75 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 DLK1P80370 383 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF79Q15937 498 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 DMKNQ6E0U4 476 aaPredicted RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 SPRED2Q7Z698 418 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 ADAD2Q8NCV1 583 aaKnown RBP10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 MRGPRX3Q96LB0 322 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 FRRS1LQ9P0K9 344 aa10.62□□□□□ -0.71
PCDHA9-201ENST00000378122 IGKV3D-11A0A0A0MRZ8 115 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 IGHV3-43A0A0B4J1X8 118 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SMPD2O60906 423 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 FCGR3BO75015 233 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 IGHA1P01876 353 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 IGKV3-11P04433 115 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 IGHV3-43DP0DP04 118 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 GABRA1P14867 456 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 OR4D9Q8NGE8 314 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 ASB10Q8WXI3 467 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SPSB1Q96BD6 273 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 PCGF1Q9BSM1 259 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 CACNA1GO43497 2377 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 PLA2G10O15496 165 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 LANCL1O43813 399 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 PF4P02776 101 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 TTC9Q92623 222 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 RASL12Q9NYN1 266 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 PRSS23O95084 383 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 CXCL10P02778 98 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 DHRS7BQ6IAN0 325 aaPredicted RBP10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 CHAC2Q8WUX2 184 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 RPS4XP62701 263 aaKnown RBP10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF154Q13106 437 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 KLF9Q13886 244 aaPredicted RBP10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SFTPA2Q8IWL1 248 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SFTPA1Q8IWL2 248 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 TCTEX1D1Q8N7M0 179 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 OR1L3Q8NH93 324 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 GPBAR1Q8TDU6 330 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 M0R143 59 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 F2RL2O00254 374 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 PGA3P0DJD8 388 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SCAND1P57086 179 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 FAM219AQ8IW50 185 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 STPG2Q8N412 459 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms