RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CDNFQ49AH0 187 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 AVPI1Q5T686 147 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 SIGIRRQ6IA17 410 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 C6orf201Q7Z4U5 140 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 RTN4RL2Q86UN3 420 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 OR4M2Q8NGB6 313 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 NEK7Q8TDX7 302 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 V9GYH0 126 aa10.85□□□□□ -0.67
CBWD3-203ENST00000377344 PTHLHP12272 177 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 HIST1H1DP16402 221 aaKnown RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 DNASE1P24855 282 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PTH2RP49190 550 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 COL10A1Q03692 680 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ZMYND11Q15326 602 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PYDC2Q56P42 97 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PLAC9Q5JTB6 97 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 TEX36Q5VZQ5 186 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 BAIAP2L2Q6UXY1 529 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 BPIFB2Q8N4F0 458 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 CD177Q8N6Q3 437 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 RAB1CQ92928 201 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 POM121Q96HA1 1249 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 FAAP24Q9BTP7 215 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PECRQ9BY49 303 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 SPACA1Q9HBV2 294 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 AKIP1Q9NQ31 210 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ZNF701Q9NV72 531 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 UBE2QL1A1L167 161 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 TMEM235A6NFC5 223 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 MCRIP1C9JLW8 97 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 H3BUI4 141 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 CHATP28329 748 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ETV6P41212 452 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 NR4A2P43354 598 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 GPR6P46095 362 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 TMEM33P57088 247 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PITPNAQ00169 270 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ZNF45Q02386 682 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PAN3Q58A45 887 aaKnown RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 RNASE12Q5GAN4 147 aaKnown RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 OLFML2AQ68BL7 652 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 STUMQ69YW2 141 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PYHIN1Q6K0P9 492 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 Q6P435 159 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 MFSD4AQ8N468 514 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 SUMF2Q8NBJ7 301 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ANGPTL6Q8NI99 470 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 GCDHQ92947 438 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 CCL13Q99616 98 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 TMEM165Q9HC07 324 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ING3Q9NXR8 418 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
CBWD3-203ENST00000377344 ELF5Q9UKW6 265 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-203ENST00000377344 PTPN13Q12923 2485 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 TRAV24A0A0B4J272 114 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 NKX6-3A6NJ46 265 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 FOXI3A8MTJ6 420 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 SLC33A1O00400 549 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 HLA-DQB1P01920 261 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 MDH2P40926 338 aaKnown RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 KCNJ8Q15842 424 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 ABHD1Q96SE0 405 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 SULT4A1Q9BR01 284 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 TMEM246Q9BRR3 403 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 DPCDQ9BVM2 203 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 WDR12Q9GZL7 423 aaKnown RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 CHST6Q9GZX3 395 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF665Q9H7R5 613 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 AUNIPQ9H7T9 357 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 MYOZ1Q9NP98 299 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-203ENST00000377344 HSF4Q9ULV5 492 aa10.83□□□□□ -0.68
CBWD3-203ENST00000377344 MFNGO00587 321 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 PSPNO60542 156 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 IGHV2-70P01814 119 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 PDLIM4P50479 330 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 MRPS15P82914 257 aaKnown RBP10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ARFRP1Q13795 201 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 RBM39Q14498 530 aaKnown RBP10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF846Q147U1 533 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ARL6IP1Q15041 203 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF79Q15937 498 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF260Q3ZCT1 412 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 C15orf40Q8WUR7 153 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 DYRK2Q92630 601 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 GSX2Q9BZM3 304 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 NARFLQ9H6Q4 476 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 IFT22Q9H7X7 185 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 RCC2Q9P258 522 aaKnown RBP10.82□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF222Q9UK12 451 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 KCNK7Q9Y2U2 307 aa10.82□□□□□ -0.68
CBWD3-203ENST00000377344 NBPF19A0A087WUL8 3843 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms