RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MPZP25189 248 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 UQCC3Q6UW78 93 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 ZNF100Q8IYN0 542 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 C17orf78Q8N4C9 275 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 EXTL1Q92935 676 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 KIRREL1Q96J84 757 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 WNT5BQ9H1J7 359 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 GPR35Q9HC97 309 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 SLC7A10Q9NS82 523 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 MED13Q9UHV7 2174 aa11.2□□□□□ -0.62
USP11-204ENST00000377107 C9JQL5 133 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 ETV2O00321 342 aaPredicted RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 GPR37O15354 613 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 JTBO76095 146 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 BCL3P20749 454 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 FAM3AP98173 230 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CRIP3Q6Q6R5 217 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 LHFPL2Q6ZUX7 228 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 MYPOPQ86VE0 399 aaPredicted RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 ZFP62Q8NB50 900 aaPredicted RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 CDRT15L2A8MXV6 281 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 F8VVB4 439 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 F8VWA3 439 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 HSPA12AO43301 675 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 NGFP01138 241 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CRYBA1P05813 215 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 SRD5A2P31213 254 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 Q0VFX4 171 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 COL19A1Q14993 1142 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 RAB11FIP2Q7L804 512 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 SLC35G3Q8N808 338 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 ADAMTS17Q8TE56 1095 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CLDN23Q96B33 292 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 FAM212BQ9NTI7 297 aaPredicted RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 CRYM-AS1A6NIL9 109 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 ZNF732B4DXR9 585 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 ST8SIA3O43173 380 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP11-204ENST00000377107 SPP1P10451 314 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 ZNF44P15621 663 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CHATP28329 748 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 TLE1Q04724 770 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 LGI3Q8N145 548 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 CPEB3Q8NE35 698 aaKnown RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 M1APQ8TC57 530 aa11.19□□□□□ -0.62
USP11-204ENST00000377107 FOXD3Q9UJU5 478 aaPredicted RBP11.19□□□□□ -0.62
USP11-204ENST00000377107 NKX2-6A6NCS4 301 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 FGF16O43320 207 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 DEDDO75618 318 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 SCTP09683 121 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 RXFP4Q8TDU9 374 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 TP53RKQ96S44 253 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 ZNF816-ZNF321PA0A0X1KG74 233 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 PDCD6O75340 191 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 SYNGR4O95473 234 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 TK1P04183 234 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 ARG1P05089 322 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 FUT3P21217 361 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 FUT6P51993 359 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 F2RL1P55085 397 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 MST1LQ2TV78 715 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 DHRS11Q6UWP2 260 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 TIPARPQ7Z3E1 657 aaKnown RBP11.18□□□□□ -0.62
USP11-204ENST00000377107 OR6C6A6NF89 314 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 DKK1O94907 266 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 CER1O95813 267 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 MAGEA5P43359 124 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 OR2B8PP59922 312 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 PCBD1P61457 104 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 NAAAQ02083 359 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 RTL6Q6ICC9 239 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 C6orf15Q6UXA7 325 aaPredicted RBP11.18□□□□□ -0.62
USP11-204ENST00000377107 PPP1R32Q7Z5V6 425 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 CLCC1Q96S66 551 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 NUDT16L1Q9BRJ7 211 aaKnown RBP11.18□□□□□ -0.62
USP11-204ENST00000377107 TM2D1Q9BX74 207 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 ZFP57Q9NU63 452 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 DNAJB11Q9UBS4 358 aa11.18□□□□□ -0.62
USP11-204ENST00000377107 E5RGE8 158 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 ZNF806P0C7X5 589 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 PRDX4Q13162 271 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 ADAM5Q6NVV9 412 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 CPT1CQ8TCG5 803 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 INTS12Q96CB8 462 aaKnown RBP11.17□□□□□ -0.62
USP11-204ENST00000377107 DEFB127Q9H1M4 99 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 NSG2Q9Y328 171 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 LOC102723996A0A087X1L8 192 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 TRAPPC2LH3BP13 241 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 PPYP01298 95 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 CST2P09228 141 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 HAGHQ16775 308 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 CRIM1Q9NZV1 1036 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms