RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 NIPAL2Q9H841 368 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 SLC17A5Q9NRA2 495 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 FKBP14Q9NWM8 211 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 BABAM2Q9NXR7 383 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 IKZF2Q9UKS7 526 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 CAB39Q9Y376 341 aaPredicted RBP4.62□□□□□ -1.67
SSX3-203ENST00000376895 CFAP46Q8IYW2 2715 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 POLEQ07864 2286 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 MGAQ8IWI9 3026 aa4.62□□□□□ -1.67
SSX3-203ENST00000376895 GCN1Q92616 2671 aaKnown RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 ALPK2Q86TB3 2170 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 COL6A6A6NMZ7 2263 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 IGHV4-4A0A075B6R2 117 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ARPC4-TTLL3A0A0A6YYG9 625 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 OR6C6A6NF89 314 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ACOD1A6NK06 481 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 J3QRE1 110 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 BMPR1BO00238 502 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 RER1O15258 196 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ZG16O60844 167 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 NOL3O60936 208 aaKnown RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 HLA-HP01893 362 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 SERPINA5P05154 406 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 PATE4P0C8F1 98 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ZNF32P17041 273 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 STOMP27105 288 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 UGT2B10P36537 528 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ALDH3B1P43353 468 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 HTR5AP47898 357 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ETV1P50549 477 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 TAS2R43P59537 309 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 GRB2P62993 217 aaKnown RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 HERV-K104P63124 156 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 HIST1H3AP68431 136 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 RPL36AP83881 106 aaKnown RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 PSG4Q00888 419 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 MEF2DQ14814 521 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 RAB35Q15286 201 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 TSC22D1Q15714 1073 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 FBXL19-AS1Q494R0 122 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 PABPC1L2AQ5JQF8 200 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 HIST2H3PS2Q5TEC6 136 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 OTPQ5XKR4 325 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ZNF774Q6NX45 483 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 RFPL4BQ6ZWI9 263 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 HIST2H3AQ71DI3 136 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ZNF679Q8IYX0 411 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 SYS1Q8N2H4 156 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ZNF283Q8N7M2 679 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 RELL2Q8NC24 303 aaPredicted RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 OR4D10Q8NGI6 311 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 OR52N1Q8NH53 320 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 OR1F12Q8NHA8 337 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 SMAP2Q8WU79 429 aaPredicted RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 RNF133Q8WVZ7 376 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 FCGR1BQ92637 280 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 S100PBPQ96BU1 408 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 RAB39BQ96DA2 213 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 FBXO17Q96EF6 278 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 COQ7Q99807 217 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 MRPS26Q9BYN8 205 aaKnown RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 OR2H1Q9GZK4 316 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ACTR6Q9GZN1 396 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 TMEM231Q9H6L2 316 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ELOVL3Q9HB03 270 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 EIF3KQ9UBQ5 218 aaKnown RBP4.61□□□□□ -1.67
SSX3-203ENST00000376895 CLEC2DQ9UHP7 191 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 GNG8Q9UK08 70 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 LHFPL6Q9Y693 200 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ATMQ13315 3056 aa4.61□□□□□ -1.67
SSX3-203ENST00000376895 ZGRF1Q86YA3 2104 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 A0A0U1RRA0 63 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 A0A1W2PR80 420 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 C5orf49A4QMS7 147 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 NKX2-6A6NCS4 301 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 ZNF878C9JN71 531 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 F5H5K5 113 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 J3QKU1 62 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 CCSO14618 274 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 CHEK1O14757 476 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 RPP14O95059 124 aaKnown RBP4.6□□□□□ -1.67
SSX3-203ENST00000376895 PTBP3O95758 552 aaKnown RBP4.6□□□□□ -1.67
SSX3-203ENST00000376895 HTR1AP08908 422 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 MMP7P09237 267 aaPredicted RBP4.6□□□□□ -1.67
SSX3-203ENST00000376895 LIMS3P0CW19 117 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 LIMS4P0CW20 117 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 HSMCR30P0CW71 290 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 COX5BP10606 129 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 CCNOP22674 350 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 OPRL1P41146 370 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 RPS27P42677 84 aaKnown RBP4.6□□□□□ -1.67
SSX3-203ENST00000376895 MAP2K4P45985 399 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 ZNF83P51522 516 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 WNT4P56705 351 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 OR12D2P58182 307 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 ZNF85Q03923 595 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 EMX1Q04741 257 aaPredicted RBP4.6□□□□□ -1.67
SSX3-203ENST00000376895 TBC1D28Q2M2D7 210 aa4.6□□□□□ -1.67
SSX3-203ENST00000376895 ZNF829Q3KNS6 432 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms