RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ZNF705GA8MUZ8 300 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 TAAR5O14804 337 aa12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 NPBWR2P48146 333 aa12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 NKX6-1P78426 367 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CXorf66Q5JRM2 361 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CXorf67Q86X51 503 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SPSB2Q99619 263 aa12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IFT22Q9H7X7 185 aa12.55□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SIRPB1O00241 398 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CPT1CQ8TCG5 803 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 MRGPRFQ96AM1 343 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 OCSTAMPQ9BR26 566 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 UBE2ZQ9H832 354 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 C9JQL5 133 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CYB5BO43169 146 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SYNGR4O95473 234 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 FABP1P07148 127 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 GRPP07492 148 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF154Q13106 437 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 TRIM61Q5EBN2 209 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SPINK14Q6IE38 97 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 RHBDD1Q8TEB9 315 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ASB13Q8WXK3 278 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 GHRLQ9UBU3 117 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 TRAPPC2LQ9UL33 140 aa12.54□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IGHV5-10-1A0A0J9YXX1 117 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF732B4DXR9 585 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IDH3GP51553 393 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 EDEM2Q9BV94 578 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 MIOXQ9UGB7 285 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 AQP7P3A6NL99 342 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SUMO3P55854 103 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 VAX1Q5SQQ9 334 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 COL13A1Q5TAT6 717 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF468Q5VIY5 522 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CLDN1O95832 211 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IL2RAP01589 272 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 GSK3AP49840 483 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SULT1A1P50225 295 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF92Q03936 586 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ADIRFQ15847 76 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 OR2C3Q8N628 320 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 PTX4Q96A99 478 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CCL28Q9NRJ3 127 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
TNFRSF1B-201ENST00000376259 LOC102725191A0A1B0GVB3 256 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 METTL15P1P0C7V9 234 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ABHD17BQ5VST6 288 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ZNF343Q6P1L6 599 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 HLA-CQ95604 372 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 CHST5Q9GZS9 411 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 ACACAQ13085 2346 aa12.52□□□□□ -0.4
TNFRSF1B-201ENST00000376259 LDLRAD4O15165 306 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MECP2P51608 486 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PMP22Q01453 160 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 GAPTQ8N292 157 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 POC1AQ8NBT0 407 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OR10AD1Q8NGE0 317 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DUSP23Q9BVJ7 150 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 THADAQ6YHU6 1953 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF816-ZNF321PA0A0X1KG74 233 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 TPPPO94811 219 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SCAF4O95104 1147 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CALCRP30988 508 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MPV17LQ2QL34 196 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LYZL4Q96KX0 146 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PRO1933Q9H354 126 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 GAB2Q9UQC2 676 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 TIMM10BQ9Y5J6 103 aa12.52□□□□□ -0.41
TNFRSF1B-201ENST00000376259 GJE1A6NN92 205 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 H0YL77 283 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SCTP09683 121 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZP4Q12836 540 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF266Q14584 549 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF561Q8N587 486 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ADAMTS17Q8TE56 1095 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ARHGAP21Q5T5U3 1957 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 C2orf16Q68DN1 1984 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 C3orf85A0A1B0GTC6 90 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FCGR3AP08637 254 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms