RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 TCRBV5S2A0A599 114 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CLDN34H7C241 214 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 PRAF2O60831 178 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FAM157CP0CG43 387 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 GABRA1P14867 456 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 GPX3P22352 226 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 Q5PR19 223 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM42Q69YG0 159 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 OR1K1Q8NGR3 316 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 PHYHIPLQ96FC7 376 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 ACOT13Q9NPJ3 140 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 FOXJ3Q9UPW0 622 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 CCDC88AQ3V6T2 1871 aa4.16□□□□□ -1.74
SCN1A-202ENST00000375405 TRGV5A0A0B4J1U4 118 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 TRAV38-1A0A0B4J264 116 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 C7orf71A4D174 169 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 VWC2LB2RUY7 222 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 CEACAM4O75871 244 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 CA1P00915 261 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-202ENST00000375405 DDOSTP39656 456 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SRSF6Q13247 344 aaKnown RBP4.15□□□□□ -1.74
SCN1A-202ENST00000375405 FAM106AQ4KMX7 169 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 GBGT1Q8N5D6 347 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 RFESDQ8TAC1 157 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SPPL3Q8TCT6 385 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 HDHD3Q9BSH5 251 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-202ENST00000375405 PLA2G3Q9NZ20 509 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 A2ML1A8K2U0 1454 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 A0A0U1RRA0 63 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 CTDSPLO15194 276 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 COCHO43405 550 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 PRR35P0CG20 571 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 GLIPR1L1Q6UWM5 242 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF66Q6ZN08 573 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SEH1LQ96EE3 360 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 IP6K3Q96PC2 410 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 DNAJC4Q9NNZ3 241 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 MRPL16Q9NX20 251 aaKnown RBP4.15□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM56-RWDD3S4R434 201 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SPEF2Q9C093 1822 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 CXorf65A6NEN9 183 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 TYROBPO43914 113 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 PNLIPP16233 465 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 OPRL1P41146 370 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SPINT3P49223 89 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 MFAP2P55001 183 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SSPNQ14714 243 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 MED25Q71SY5 747 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 CDRT4Q8N9R6 151 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 ORAOV1Q8WV07 137 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 PELI1Q96FA3 418 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM19Q96HH6 336 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 GUCD1Q96NT3 240 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF2Q9BSG1 426 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-202ENST00000375405 AUNIPQ9H7T9 357 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 MANBALQ9NQG1 85 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 HSF4Q9ULV5 492 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 CLDN16Q9Y5I7 305 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 SLC25A15Q9Y619 301 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 MYO5BQ9ULV0 1848 aa4.15□□□□□ -1.74
SCN1A-202ENST00000375405 IGSF23A1L1A6 192 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 CCSO14618 274 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 LDLRAD4O15165 306 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 ADAP1O75689 374 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 TMEM50AO95807 157 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 THBDP07204 575 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 CTXN2P0C2S0 81 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 TMEM33P57088 247 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 TMEM258P61165 79 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 MEF2BQ02080 365 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 RBMS2Q15434 407 aaKnown RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 ZNF625Q96I27 306 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 SLC25A10Q9UBX3 287 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 TNFSF18Q9UNG2 199 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 R4GN57 208 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 TMEM212A6NML5 194 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 ZNF487B1APH4 448 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 RER1O15258 196 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 CKS2P33552 79 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 HBBP68871 147 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 PJVKQ0ZLH3 352 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 SLC10A2Q12908 348 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 SYPL1Q16563 259 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 FBXL22Q6P050 247 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 RPS19BP1Q86WX3 136 aaKnown RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 LFNGQ8NES3 379 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 HMGCLL1Q8TB92 370 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 C20orf27Q9GZN8 174 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 APOBEC3GQ9HC16 384 aaKnown RBP4.15□□□□□ -1.75
SCN1A-202ENST00000375405 LOC390937A0A1W2PQ73 354 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 hADV38S2A0JD32 116 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 CDHR4A6H8M9 788 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 TMEM200CA6NKL6 621 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 GGTLC3B5MD39 225 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 LANCL1O43813 399 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 GZMMP51124 257 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 OR1Q1Q15612 314 aa4.15□□□□□ -1.75
SCN1A-202ENST00000375405 LRRC75BQ2VPJ9 315 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms