RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SEC14L6B5MCN3 397 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 TRDCB7Z8K6 153 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 OR2J2O76002 312 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 SCAF4O95104 1147 aaKnown RBP18.32■□□□□ 0.52
UPF3A-202ENST00000375299 PNLIPP16233 465 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 AADACP22760 399 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 NKX2-1P43699 371 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-202ENST00000375299 NXPH1P58417 271 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 DEFA6Q01524 100 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 ICAM4Q14773 271 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 CDCP2Q5VXM1 449 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 PLEKHF2Q9H8W4 249 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 SIRT7Q9NRC8 400 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 MYOTQ9UBF9 498 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 RTTNQ86VV8 2226 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 C3orf85A0A1B0GTC6 90 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 CXorf65A6NEN9 183 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 HSPA12AO43301 675 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 PIGYQ3MUY2 71 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 SP5Q6BEB4 398 aaPredicted RBP18.32■□□□□ 0.52
UPF3A-202ENST00000375299 SPNS3Q6ZMD2 512 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 KMT5CQ86Y97 462 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 OR2AE1Q8NHA4 323 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 TMEM171Q8WVE6 324 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 TVP23CQ96ET8 276 aa18.32■□□□□ 0.52
UPF3A-202ENST00000375299 RBM24Q9BX46 236 aaKnown RBP18.32■□□□□ 0.52
UPF3A-202ENST00000375299 DHHO43323 396 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 ONECUT2O95948 504 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HSPB1P04792 205 aaKnown RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 ERVFRD-1P60508 538 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 SRPXP78539 464 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 COL19A1Q14993 1142 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 ZNF506Q5JVG8 444 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 ASCL4Q6XD76 172 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 CPEB2Q7Z5Q1 589 aaKnown RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 SLC25A31Q9H0C2 315 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 MYO15AQ9UKN7 3530 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BKO60814 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 ZFAND5O76080 213 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BJP06899 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 KLK3P07288 261 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 OMGP23515 440 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BOP23527 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 FKBP2P26885 142 aaKnown RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BBP33778 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BDP58876 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BCP62807 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST2H2BEQ16778 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 TMEM252Q8N6L7 170 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 CYB561D1Q8N8Q1 229 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 FADS6Q8N9I5 356 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 SUMF1Q8NBK3 374 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BHQ93079 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 BORCS8Q96FH0 119 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 ZNF385AQ96PM9 386 aaKnown RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BNQ99877 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 HIST1H2BMQ99879 126 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 LYRM2Q9NU23 88 aaPredicted RBP18.31■□□□□ 0.52
UPF3A-202ENST00000375299 URGCP-MRPS24S4R325 110 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 MED12Q93074 2177 aa18.31■□□□□ 0.52
UPF3A-202ENST00000375299 TGIF2-C20orf24A0A0A6YYL0 155 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 MPPED1O15442 326 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 PIAS2O75928 621 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 RGS19P49795 217 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 RBP2P50120 134 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 LHFPL2Q6ZUX7 228 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 OSR2Q8N2R0 312 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 CADM4Q8NFZ8 388 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 OR10D4PQ8NGN7 298 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 HS3ST3B1Q9Y662 390 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 WSB1Q9Y6I7 421 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 ZNF732B4DXR9 585 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 RPL36A-HNRNPH2H7BZ11 118 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 CD63P08962 238 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 SRFP11831 508 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 H3F3AP84243 136 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 SPIN2AQ99865 258 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 SPIN2BQ9BPZ2 258 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 NIPSNAP3BQ9BS92 247 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 TMEM222Q9H0R3 208 aa18.3■□□□□ 0.52
UPF3A-202ENST00000375299 IGKV1-12A0A0C4DH73 117 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 ZNF587BE7ETH6 402 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 SSSCA1O60232 199 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 PPYP01298 95 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 IGKV1D-12P01611 117 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 GLIPR1P48060 266 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 NKAIN1Q4KMZ8 207 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 RABEPKQ7Z6M1 372 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 OR5C1Q8NGR4 320 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 OR13D1Q8NGV5 346 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 PRDM13Q9H4Q3 707 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 GLRX2Q9NS18 164 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 SLC7A11Q9UPY5 501 aa18.29■□□□□ 0.52
UPF3A-202ENST00000375299 MYF5P13349 255 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 VAMP2P63027 116 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 OR8B8Q15620 311 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 Q6ZPA2 131 aa18.28■□□□□ 0.52
UPF3A-202ENST00000375299 FAM185AQ8N0U4 392 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms