RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 Q6ZPA2 131 aa14.37□□□□□ -0.11
PTPN20-203ENST00000374342 RELL2Q8NC24 303 aaPredicted RBP14.37□□□□□ -0.11
PTPN20-203ENST00000374342 GRPEL2Q8TAA5 225 aa14.37□□□□□ -0.11
PTPN20-203ENST00000374342 MSL2Q9HCI7 577 aa14.37□□□□□ -0.11
PTPN20-203ENST00000374342 NECAP2Q9NVZ3 263 aa14.37□□□□□ -0.11
PTPN20-203ENST00000374342 PIPOXQ9P0Z9 390 aa14.37□□□□□ -0.11
PTPN20-203ENST00000374342 PAIP2BQ9ULR5 123 aaKnown RBP14.37□□□□□ -0.11
PTPN20-203ENST00000374342 MGAT4AQ9UM21 535 aa14.37□□□□□ -0.11
PTPN20-203ENST00000374342 F5H5P2 479 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 CDIPTO14735 213 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 CRYAAP02489 173 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 PI3P19957 117 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 GRK1Q15835 563 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 FAM76BQ5HYJ3 339 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 TMEM211Q6ICI0 200 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 C1orf174Q8IYL3 243 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 OR11H4Q8NGC9 324 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 WDR89Q96FK6 387 aaPredicted RBP14.36□□□□□ -0.11
PTPN20-203ENST00000374342 ZNF2Q9BSG1 426 aaPredicted RBP14.36□□□□□ -0.11
PTPN20-203ENST00000374342 C5orf66Q9H5L9 145 aa14.36□□□□□ -0.11
PTPN20-203ENST00000374342 C9orf170A2RU37 121 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 CEACAM18A8MTB9 384 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 MCRIP1C9JLW8 97 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 SLC22A5O76082 557 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 OR5H8P0DN80 308 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 PGAM2P15259 253 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 H2BFSP57053 126 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 RAP2BP61225 183 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 SNRPD2P62316 118 aaKnown RBP14.35□□□□□ -0.11
PTPN20-203ENST00000374342 IL13RA1P78552 427 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 C3orf36Q3SXR2 165 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 DCAF12L2Q5VW00 463 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 FAHD2BQ6P2I3 314 aaPredicted RBP14.35□□□□□ -0.11
PTPN20-203ENST00000374342 Q6ZR03 302 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 PEG10Q86TG7 708 aaKnown RBP14.35□□□□□ -0.11
PTPN20-203ENST00000374342 Q8IYB0 196 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 C9orf62Q8N4C0 152 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 SUMF2Q8NBJ7 301 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 CASTOR1Q8WTX7 329 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 FAHD2AQ96GK7 314 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 SCGB3A2Q96PL1 93 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 TMEM246Q9BRR3 403 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 CXXC4Q9H2H0 198 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 GPR132Q9UNW8 380 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 HSPB11Q9Y547 144 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 MAP1BP46821 2468 aaKnown RBP14.35□□□□□ -0.11
PTPN20-203ENST00000374342 ATP6V1G2-DDX39BF2Z307 99 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 G3V3Q6 166 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 TPD52L2O43399 206 aaKnown RBP14.35□□□□□ -0.11
PTPN20-203ENST00000374342 PGA5P0DJD9 388 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 LAMTOR1Q6IAA8 161 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 RHOFQ9HBH0 211 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 SPACA1Q9HBV2 294 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 SPEF1Q9Y4P9 236 aa14.35□□□□□ -0.11
PTPN20-203ENST00000374342 TLN1Q9Y490 2541 aaKnown RBP14.34□□□□□ -0.11
PTPN20-203ENST00000374342 HS3ST1O14792 307 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 OR2A4O95047 310 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 NXPH2O95156 264 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 ZNF44P15621 663 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 KLRB1Q12918 225 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 MSMPQ1L6U9 139 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 Q5BKY6 102 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 PRAMEF6Q5VXH4 476 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 LIN54Q6MZP7 749 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 VHLLQ6RSH7 139 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 RDH5Q92781 318 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 TMEM230Q96A57 120 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 OR2A7Q96R45 310 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 NRIP2Q9BQI9 281 aa14.34□□□□□ -0.11
PTPN20-203ENST00000374342 TRAV24A0A0B4J272 114 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 A6NLC8 198 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 ZNF205O95201 554 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 ID4P47928 161 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 C22orf34Q6ZV56 151 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 LRP11Q86VZ4 500 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 ZCCHC14Q8WYQ9 949 aaKnown RBP14.33□□□□□ -0.11
PTPN20-203ENST00000374342 PHB2Q99623 299 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 TMPRSS13Q9BYE2 586 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 WDR13Q9H1Z4 485 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 ELOVL5Q9NYP7 299 aa14.33□□□□□ -0.11
PTPN20-203ENST00000374342 CCSO14618 274 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 NAPSAO96009 420 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 GSTT2P0CG29 244 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 ERVK11-1P61568 191 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 SURF2Q15527 256 aaPredicted RBP14.33□□□□□ -0.12
PTPN20-203ENST00000374342 MPPED2Q15777 294 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 TMEM128Q5BJH2 165 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 ZNF826PQ6ZT77 177 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 TMEM185AQ8NFB2 350 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 GTF3AQ92664 365 aaKnown RBP14.33□□□□□ -0.12
PTPN20-203ENST00000374342 RTBDNQ9BSG5 229 aaPredicted RBP14.33□□□□□ -0.12
PTPN20-203ENST00000374342 DPCDQ9BVM2 203 aaPredicted RBP14.33□□□□□ -0.12
PTPN20-203ENST00000374342 FXYD6Q9H0Q3 95 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 OPN4Q9UHM6 478 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 DUSP13Q9UII6 198 aa14.33□□□□□ -0.12
PTPN20-203ENST00000374342 C14orf166Q9Y224 244 aaKnown RBP14.33□□□□□ -0.12
PTPN20-203ENST00000374342 CHD3Q12873 2000 aaKnown RBP14.32□□□□□ -0.12
PTPN20-203ENST00000374342 TRGV8A0A0C4DH27 118 aa14.32□□□□□ -0.12
PTPN20-203ENST00000374342 C16orf97H3BN30 126 aa14.32□□□□□ -0.12
PTPN20-203ENST00000374342 SIRPB1O00241 398 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms