RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TPD52L2O43399 206 aaKnown RBP16.71■□□□□ 0.27
HDAC1-201ENST00000373548 RHBDL1O75783 438 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 FGL1Q08830 312 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 PSG7Q13046 419 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 IKZF1Q13422 519 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 EXOSC2Q13868 293 aaKnown RBP16.71■□□□□ 0.27
HDAC1-201ENST00000373548 ANKRD55Q3KP44 614 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 TMUB2Q71RG4 321 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 SCNM1Q9BWG6 230 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 SHPKQ9UHJ6 478 aa16.71■□□□□ 0.27
HDAC1-201ENST00000373548 IQCF6A8MYZ5 107 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 C3orf80F5H4A9 247 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 KNG1P01042 644 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 CTSDP07339 412 aaPredicted RBP16.7■□□□□ 0.26
HDAC1-201ENST00000373548 CECR9P0C854 216 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 S100A11P31949 105 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 SERPINF1P36955 418 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 MPV17P39210 176 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 NHLH1Q02575 133 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 PPP1R1CQ8WVI7 109 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 MICU1Q9BPX6 476 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 WDR13Q9H1Z4 485 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 PLK3Q9H4B4 646 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 SHANK1Q9Y566 2161 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 BOD1L1Q8NFC6 3051 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 IGLV1-44P01699 117 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 CRHP06850 196 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 RPA2P15927 270 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 FAM76BQ5HYJ3 339 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 C1orf185Q5T7R7 199 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 BHLHA15Q7RTS1 189 aaPredicted RBP16.7■□□□□ 0.26
HDAC1-201ENST00000373548 FAM58AQ8N1B3 248 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 KLF14Q8TD94 323 aaPredicted RBP16.7■□□□□ 0.26
HDAC1-201ENST00000373548 CHMP1AQ9HD42 196 aaPredicted RBP16.7■□□□□ 0.26
HDAC1-201ENST00000373548 COMMD9Q9P000 198 aa16.7■□□□□ 0.26
HDAC1-201ENST00000373548 LRP5LA4QPB2 252 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 EEF1E1-BLOC1S5C9J1V9 151 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 NAPSAO96009 420 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 LRRC37A5PQ49AS3 106 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 BEND4Q6ZU67 534 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 LINC00596Q86U02 117 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 SPACA3Q8IXA5 215 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 COQ8AQ8NI60 647 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 ABHD17AQ96GS6 310 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 ADAT1Q9BUB4 502 aaKnown RBP16.69■□□□□ 0.26
HDAC1-201ENST00000373548 MFFQ9GZY8 342 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 OBP2BQ9NPH6 170 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 C5orf51A6NDU8 294 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 IFNA7P01567 189 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 C11orf87Q6NUJ2 197 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 TMEM65Q6PI78 240 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 DHRS9Q9BPW9 319 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 ARL6Q9H0F7 186 aa16.69■□□□□ 0.26
HDAC1-201ENST00000373548 ANKRD11Q6UB99 2663 aaPredicted RBP16.68■□□□□ 0.26
HDAC1-201ENST00000373548 C13orf42A0A1B0GVH6 325 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 OR5H1A6NKK0 313 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 HSPB6O14558 160 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 ADAP1O75689 374 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 SLC25A4P12235 298 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 SELEP16581 610 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 FCGR2CP31995 323 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 IL13RA2Q14627 380 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 GSG1LQ6UXU4 331 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 Q6ZS49 121 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 ZNF546Q86UE3 836 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 SCCPDHQ8NBX0 429 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 RAB18Q9NP72 206 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 RDH8Q9NYR8 311 aa16.68■□□□□ 0.26
HDAC1-201ENST00000373548 ZNF728P0DKX0 622 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 KRTCAP3Q53RY4 240 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 FAM180AQ6UWF9 173 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 C3P1Q6ZMU1 363 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 SUMF2Q8NBJ7 301 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 TOMM40LQ969M1 308 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 Q9N2K0 584 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 WASF3Q9UPY6 502 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 TP53TG5Q9Y2B4 290 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 ACACAQ13085 2346 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 LAMA5O15230 3695 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 IGHV1-18A0A0C4DH31 117 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 H0YL77 283 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 SRSF7Q16629 238 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC1-201ENST00000373548 EIF2S3LQ2VIR3 472 aaKnown RBP16.67■□□□□ 0.26
HDAC1-201ENST00000373548 ZNF474Q6S9Z5 364 aaPredicted RBP16.67■□□□□ 0.26
HDAC1-201ENST00000373548 OR8H3Q8N146 312 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 NEK7Q8TDX7 302 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 SPACA1Q9HBV2 294 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 UBQLN2Q9UHD9 624 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 SLC25A15Q9Y619 301 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 SPTBN4Q9H254 2564 aa16.67■□□□□ 0.26
HDAC1-201ENST00000373548 TRAV24A0A0B4J272 114 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 CRYM-AS1A6NIL9 109 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 IFNA2P01563 188 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 TIMP3P35625 211 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 FXYD4P59646 89 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 ZNF154Q13106 437 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 IGSF11Q5DX21 431 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 ZNF324BQ6AW86 544 aaPredicted RBP16.66■□□□□ 0.26
HDAC1-201ENST00000373548 FAM57AQ8TBR7 257 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 TMEM165Q9HC07 324 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms