RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 C14orf166Q9Y224 244 aaKnown RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 MAP1LC3B2A6NCE7 125 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 SPINT1O43278 529 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 TYMSP04818 313 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 CT62P0C5K7 136 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 TCN2P20062 427 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 CTRLP40313 264 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF41P51814 821 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 LINC00310P59036 64 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 RPL18Q07020 188 aaKnown RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 UNQ5815/PRO19632Q6UWF5 114 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ADAT3Q96EY9 351 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 SPACA5Q96QH8 159 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ABHD6Q9BV23 337 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 MAP1LC3BQ9GZQ8 125 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 LIME1Q9H400 295 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 HCFC1R1Q9NWW0 138 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ATG2BQ96BY7 2078 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 IGHV2OR16-5A0A0B4J2B6 119 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ZFP92A6NM28 416 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 BCL2P10415 239 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 CSNK2A1P68400 391 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 EGR4Q05215 589 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 TMEM187Q14656 261 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 MORN2Q502X0 79 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 TCEAL8Q8IYN2 117 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 SLC22A24Q8N4F4 322 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 CSNK2A3Q8NEV1 391 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 THAP3Q8WTV1 239 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 LIPHQ8WWY8 451 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF665Q9H7R5 613 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 THAP10Q9P2Z0 257 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 TP53TG3Q9ULZ0 132 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 RNF24Q9Y225 148 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 GVINP1Q7Z2Y8 2422 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 MAP1BP46821 2468 aaKnown RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 PROB1E7EW31 1015 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 FOXS1O43638 330 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 HLA-DQA2P01906 255 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 H2BFMP0C1H6 154 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 EPHA8P29322 1005 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 METAP1P53582 386 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 UBE2NP61088 152 aaKnown RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 RPL15P61313 204 aaKnown RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 SLC18B1Q6NT16 456 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 OR2C3Q8N628 320 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 VN1R17PQ8TDU5 208 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF514Q96K75 400 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 VN1R3Q9BXE9 311 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 BANF2Q9H503 90 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 MMP25Q9NPA2 562 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 DECR2Q9NUI1 292 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 SLC45A2Q9UMX9 530 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 CXorf51AA0A1B0GTR3 108 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ANKUB1A6NFN9 424 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 P2RY10O00398 339 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ST8SIA3O43173 380 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 PITX3O75364 302 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 OPN1LWP04000 364 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 GRK6P43250 576 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 MGAT2Q10469 447 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 MLF2Q15773 248 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ADIRFQ15847 76 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 FBLN7Q53RD9 439 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 WDFY1Q8IWB7 410 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 NRSN1Q8IZ57 195 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 CISD2Q8N5K1 135 aaKnown RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF524Q96C55 264 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 C18orf12Q96KH6 178 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 REPIN1Q9BWE0 567 aaKnown RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF703Q9H7S9 590 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-201ENST00000373019 Q9N2K0 584 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 LAMTOR2Q9Y2Q5 125 aa8.32□□□□□ -1.08
SF3A3-201ENST00000373019 OBSL1O75147 1896 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 FGF17O60258 216 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 SEMA4FO95754 770 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 HRASP01112 189 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 CTSDP07339 412 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-201ENST00000373019 OMGP23515 440 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 SFTPDP35247 375 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 OCIAD2Q56VL3 154 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 D2HGDHQ8N465 521 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 RNF2Q99496 336 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 WWTR1Q9GZV5 400 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 RNF114Q9Y508 228 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 R4GMQ9 66 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 MPIG6BO95866 241 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 EMC4Q5J8M3 183 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 TMEM215Q68D42 235 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 OR4D5Q8NGN0 318 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 CORO2AQ92828 525 aa8.31□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF552Q9H707 407 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms