RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 VASH2Q86V25 355 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 BPIFB2Q8N4F0 458 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 FAM89BQ8N5H3 189 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 PNLDC1Q8NA58 520 aaKnown RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 CPEB3Q8NE35 698 aaKnown RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 SEMA6DQ8NFY4 1073 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 PIGTQ969N2 578 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 ASCL3Q9NQ33 180 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 MCTS1Q9ULC4 181 aaKnown RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 AGPAT2O15120 278 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 RAD51DO75771 328 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 SYNGR4O95473 234 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 LIPCP11150 499 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 CD46P15529 392 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 HIST1H1DP16402 221 aaKnown RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 ZBTB25P24278 435 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 PSMB6P28072 239 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 CASP6P55212 293 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 SOX8P57073 446 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 CD163Q86VB7 1156 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 RNASE11Q8TAA1 199 aaKnown RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
GPC3-201ENST00000370818 PARPBPQ9NWS1 579 aa11.1□□□□□ -0.63
GPC3-201ENST00000370818 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 NKX2-8O15522 239 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 IFNA2P01563 188 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 CSN2P05814 226 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 LPAR6P43657 344 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 ARF1P84077 181 aaKnown RBP11.09□□□□□ -0.63
GPC3-201ENST00000370818 NSUN5P2Q63ZY6 315 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 C1QL4Q86Z23 238 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 MRGPRFQ96AM1 343 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 MISP3Q96FF7 219 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 C2orf88Q9BSF0 95 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 GPR173Q9NS66 373 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 SLC2A8Q9NY64 477 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 CSAG2Q9Y5P2 127 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 KPTNQ9Y664 436 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 DMXL1Q9Y485 3027 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 FOXI3A8MTJ6 420 aaPredicted RBP11.09□□□□□ -0.63
GPC3-201ENST00000370818 EEF1E1-BLOC1S5C9J1V9 151 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 CRHP06850 196 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 GSTP1P09211 210 aaKnown RBP11.09□□□□□ -0.63
GPC3-201ENST00000370818 DDTP30046 118 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 DVL1P1P54792 670 aaPredicted RBP11.09□□□□□ -0.63
GPC3-201ENST00000370818 MEF2DQ14814 521 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 SLC10A1Q14973 349 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 SCGB2B2Q4G0G5 96 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 RNASE10Q5GAN6 216 aaKnown RBP11.09□□□□□ -0.63
GPC3-201ENST00000370818 C9orf135Q5VTT2 229 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 ARHGAP5-AS1Q96IT6 56 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 CST11Q9H112 138 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
GPC3-201ENST00000370818 DNAJC13O75165 2243 aa11.09□□□□□ -0.63
GPC3-201ENST00000370818 BTBD17A6NE02 478 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ZNF724A8MTY0 619 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 MPZP25189 248 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 S100A2P29034 98 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 HRH1P35367 487 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ARG2P78540 354 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ZNF92Q03936 586 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 TMPRSS7Q7RTY8 843 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 LYG2Q86SG7 212 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ZSCAN4Q8NAM6 433 aaPredicted RBP11.08□□□□□ -0.64
GPC3-201ENST00000370818 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
GPC3-201ENST00000370818 OR56B1Q8NGI3 324 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 MITD1Q8WV92 249 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 S100PBPQ96BU1 408 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 URM1Q9BTM9 101 aaKnown RBP11.08□□□□□ -0.64
GPC3-201ENST00000370818 DEFB127Q9H1M4 99 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 VSIG4Q9Y279 399 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 FREM1Q5H8C1 2179 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 IGKV1-27A0A075B6S5 117 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 A0A096LPE4 126 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 H0YIZ8 118 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 TCAPO15273 167 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 LRP3O75074 770 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 IFNA17P01571 189 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 ARG1P05089 322 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 COX5BP10606 129 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 EDN3P14138 238 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 SERPINA2P20848 420 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 NUBP1P53384 320 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 RRADP55042 308 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 PPP1R1AQ13522 171 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 TMEM42Q69YG0 159 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 SLC25A42Q86VD7 318 aa11.08□□□□□ -0.64
GPC3-201ENST00000370818 PRRG4Q9BZD6 226 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms