RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SPACA3Q8IXA5 215 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 MS4A15Q8N5U1 240 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ELOA3Q8NG57 546 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 OR5AK3PQ8NH89 298 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 FGFBP3Q8TAT2 258 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SSMEM1Q8WWF3 244 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 HIST1H2ACQ93077 130 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ABTB1Q969K4 478 aaPredicted RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 LINC00470Q9BZP3 86 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 POLE4Q9NR33 117 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 PURGQ9UJV8 347 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 HHLA2Q9UM44 414 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 NPIPA1Q9UND3 350 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 LAMP3Q9UQV4 416 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 BDP1A6H8Y1 2624 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 A0A1B0GV72 72 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 A0A1B0GWA3 101 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 C17orf105B2RV13 164 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ZNF670-ZNF695F2Z2N8 137 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ZG16O60844 167 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ALOX12BO75342 701 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 UTS2O95399 124 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 IFNA10P01566 189 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 CCKARP32238 428 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 CAV2P51636 162 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 UBE2MP61081 183 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 COPZ1P61923 177 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 CDK5R1Q15078 307 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 DEFB134Q4QY38 66 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SFRP4Q6FHJ7 346 aaPredicted RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 ZNF544Q6NX49 715 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SMARCD3Q6STE5 483 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 GGNQ86UU5 652 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 MARCH9Q86YJ5 346 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 OR9Q2Q8NGE9 314 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 OR1J2Q8NGS2 313 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 PTX4Q96A99 478 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 FAM46AQ96IP4 442 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 TMEM208Q9BTX3 173 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SEMA6AQ9H2E6 1030 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TPSG1Q9NRR2 321 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TPRKBQ9Y3C4 175 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 RALGAPA1Q6GYQ0 2036 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 UNC119BA6NIH7 251 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 C15orf61A6NNL5 157 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 GSTZ1O43708 216 aaPredicted RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 RAD1O60671 282 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 PMCHP20382 165 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 CCR6P51684 374 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SPNS3Q6ZMD2 512 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TMEM91Q6ZNR0 172 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 C1orf158Q8N1D5 194 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 AQP11Q8NBQ7 271 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 OR2Z1Q8NG97 314 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TMEM255BQ8WV15 326 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TAAR8Q969N4 342 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 GRAMD2BQ96HH9 432 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 Q96MT0 163 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 IP6K3Q96PC2 410 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 OR5B12Q96R08 314 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 DCLRE1CQ96SD1 692 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 GPHA2Q96T91 129 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ABHD14AQ9BUJ0 271 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 DLL4Q9NR61 685 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 B3GNT2Q9NY97 397 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 PLEKHB1Q9UF11 243 aaPredicted RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 FIS1Q9Y3D6 152 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 RPL36Q9Y3U8 105 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 V9GYH0 126 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TMEM72A0PK05 275 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 SMCO3A2RU48 225 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 DHRS7CA6NNS2 312 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 FAM90A26D6RGX4 464 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 CCL24O00175 119 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 CELA2AP08217 269 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 UCHL1P09936 223 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 VSIG10L2P0DP72 767 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 LIPCP11150 499 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 F8A1P23610 371 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 CLDN6P56747 220 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 ZNF45Q02386 682 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 GAGE13Q4V321 117 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 KLHL12Q53G59 568 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 ELFN2Q5R3F8 820 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 TMEM78Q5T7P6 136 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 TFAP2EQ6VUC0 442 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 SLC26A10Q8NG04 563 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 NABP1Q96AH0 204 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 FUNDC2Q9BWH2 189 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 NXF5Q9H1B4 397 aaKnown RBP3.28□□□□□ -1.88
MCF2-203ENST00000370576 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 ZDHHC11Q9H8X9 412 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 MOV10Q9HCE1 1003 aaKnown RBP3.28□□□□□ -1.88
MCF2-203ENST00000370576 OR14J1Q9UGF5 321 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 IKZF2Q9UKS7 526 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 PSG8Q9UQ74 426 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 RCL1Q9Y2P8 373 aaKnown RBP3.28□□□□□ -1.88
MCF2-203ENST00000370576 V9GYY9 64 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 TRAV36DV7A0A075B6V5 113 aa3.28□□□□□ -1.88
MCF2-203ENST00000370576 A0A1W2PR80 420 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms