RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 H3BSH0 61 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 CCL24O00175 119 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ANXA8P13928 327 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 CDK2P24941 298 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 P2RX3P56373 397 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ZNF91Q05481 1191 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 APOFQ13790 326 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 KPNB1Q14974 876 aaKnown RBP12.11□□□□□ -0.47
SSR4-204ENST00000370087 ATP6AP1Q15904 470 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
SSR4-204ENST00000370087 SLC35D3Q5M8T2 416 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 KCTD18Q6PI47 426 aaPredicted RBP12.11□□□□□ -0.47
SSR4-204ENST00000370087 DEGS2Q6QHC5 323 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 Q6ZSR3 168 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ZNF695Q8IW36 515 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ZNF679Q8IYX0 411 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 C5orf56Q8N8D9 126 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ZNF596Q8TC21 504 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 EMG1Q92979 244 aaKnown RBP12.11□□□□□ -0.47
SSR4-204ENST00000370087 ITFG2Q969R8 447 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 RCHY1Q96PM5 261 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 MROQ9BYG7 248 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 KRTAP17-1Q9BYP8 105 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 ZFP57Q9NU63 452 aa12.11□□□□□ -0.47
SSR4-204ENST00000370087 RBFOX1Q9NWB1 397 aaKnown RBP12.11□□□□□ -0.47
SSR4-204ENST00000370087 UBE2J1Q9Y385 318 aaPredicted RBP12.11□□□□□ -0.47
SSR4-204ENST00000370087 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 LOC110117498-PIK3R3F6TDL0 507 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 BUB1B-PAK6H3BSN5 160 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 PEX2P28328 305 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 CHATP28329 748 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 CD34P28906 385 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 NPBWR2P48146 333 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 RIDAP52758 137 aaKnown RBP12.1□□□□□ -0.47
SSR4-204ENST00000370087 SNU13P55769 128 aaKnown RBP12.1□□□□□ -0.47
SSR4-204ENST00000370087 UBE2V2Q15819 145 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 HEPN1Q6WQI6 88 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 SLC25A26Q70HW3 274 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 TMEM179BQ7Z7N9 219 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 RTN4RL2Q86UN3 420 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 APOL4Q9BPW4 351 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 TEX12Q9BXU0 123 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
SSR4-204ENST00000370087 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A9PA6NNJ1 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 G3V2T6 193 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 M0QZK8 103 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 RPLP1P05386 114 aaKnown RBP12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 BCL3P20749 454 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 SLC6A1P30531 599 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 RBM39Q14498 530 aaKnown RBP12.09□□□□□ -0.47
SSR4-204ENST00000370087 BCL2L15Q5TBC7 163 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 TMEM236Q5W0B7 351 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 ELMOD2Q8IZ81 293 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 Q8NFD4 153 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 OR56B4Q8NH76 319 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 CHPT1Q8WUD6 406 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 PYDC1Q8WXC3 89 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
SSR4-204ENST00000370087 ENOPH1Q9UHY7 261 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 OR52A1Q9UKL2 312 aa12.09□□□□□ -0.47
SSR4-204ENST00000370087 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
SSR4-204ENST00000370087 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 SIRPB1O00241 398 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 MGST3O14880 152 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 ENTPD6O75354 484 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 ZNF254O75437 659 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 LYL1P12980 280 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 GLIPR1P48060 266 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 ARHGDIBP52566 201 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 CDK5Q00535 292 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 ODF4Q2M2E3 257 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 C9orf66Q5T8R8 295 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 SLX4IPQ5VYV7 408 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 ZFAND6Q6FIF0 208 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 DCLRE1BQ9H816 532 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.08□□□□□ -0.48
SSR4-204ENST00000370087 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 R4GMQ9 66 aa12.08□□□□□ -0.48
SSR4-204ENST00000370087 A0A1W2PPI3 338 aa12.07□□□□□ -0.48
SSR4-204ENST00000370087 CCL1P22362 96 aa12.07□□□□□ -0.48
SSR4-204ENST00000370087 ERP29P30040 261 aaKnown RBP12.07□□□□□ -0.48
SSR4-204ENST00000370087 CEACAM3P40198 252 aa12.07□□□□□ -0.48
SSR4-204ENST00000370087 OR52W1Q6IF63 320 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms