RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RGCCQ9H4X1 137 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 UNKLQ9H9P5 680 aaKnown RBP10.01□□□□□ -0.81
USF1-201ENST00000368019 GPR84Q9NQS5 396 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 SDHAF3Q9NRP4 125 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 PLA2G3Q9NZ20 509 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 HSF4Q9ULV5 492 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 PHF3Q92576 2039 aaKnown RBP10□□□□□ -0.81
USF1-201ENST00000368019 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
USF1-201ENST00000368019 IGHV1-45A0A0A0MS14 117 aa10□□□□□ -0.81
USF1-201ENST00000368019 NSG1A0A0A6YYJ2 146 aa10□□□□□ -0.81
USF1-201ENST00000368019 TRAV17A0A0B4J275 112 aa10□□□□□ -0.81
USF1-201ENST00000368019 BTBD17A6NE02 478 aa10□□□□□ -0.81
USF1-201ENST00000368019 GATCO43716 136 aaKnown RBP10□□□□□ -0.81
USF1-201ENST00000368019 TRAF3IP2O43734 574 aaPredicted RBP10□□□□□ -0.81
USF1-201ENST00000368019 PRKNO60260 465 aaPredicted RBP10□□□□□ -0.81
USF1-201ENST00000368019 CRTAPO75718 401 aaPredicted RBP10□□□□□ -0.81
USF1-201ENST00000368019 TSPAN15O95858 294 aa10□□□□□ -0.81
USF1-201ENST00000368019 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
USF1-201ENST00000368019 FABP1P07148 127 aa10□□□□□ -0.81
USF1-201ENST00000368019 ZNF44P15621 663 aa10□□□□□ -0.81
USF1-201ENST00000368019 IL11P20809 199 aa10□□□□□ -0.81
USF1-201ENST00000368019 EFNA3P52797 238 aa10□□□□□ -0.81
USF1-201ENST00000368019 UCP3P55916 312 aa10□□□□□ -0.81
USF1-201ENST00000368019 CLRN1P58418 232 aa10□□□□□ -0.81
USF1-201ENST00000368019 S100A10P60903 97 aa10□□□□□ -0.81
USF1-201ENST00000368019 SNRPEP62304 92 aaKnown RBP10□□□□□ -0.81
USF1-201ENST00000368019 RNF4P78317 190 aa10□□□□□ -0.81
USF1-201ENST00000368019 ARG2P78540 354 aa10□□□□□ -0.81
USF1-201ENST00000368019 NSDHLQ15738 373 aa10□□□□□ -0.81
USF1-201ENST00000368019 DNLZQ5SXM8 178 aa10□□□□□ -0.81
USF1-201ENST00000368019 ABHD12BQ7Z5M8 362 aaPredicted RBP10□□□□□ -0.81
USF1-201ENST00000368019 ITLN2Q8WWU7 325 aaPredicted RBP10□□□□□ -0.81
USF1-201ENST00000368019 NTNG2Q96CW9 530 aa10□□□□□ -0.81
USF1-201ENST00000368019 OXGR1Q96P68 337 aa10□□□□□ -0.81
USF1-201ENST00000368019 GPER1Q99527 375 aa10□□□□□ -0.81
USF1-201ENST00000368019 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
USF1-201ENST00000368019 POLR1DQ9Y2S0 133 aa10□□□□□ -0.81
USF1-201ENST00000368019 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
USF1-201ENST00000368019 HIVEP1P15822 2718 aa10□□□□□ -0.81
USF1-201ENST00000368019 CCDC168Q8NDH2 2452 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 C7orf77A4D0Y5 90 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 H7C1Q1 480 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 SGCEO43556 437 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 EIF1BO60739 113 aaKnown RBP9.99□□□□□ -0.81
USF1-201ENST00000368019 SERPINA5P05154 406 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 HPNP05981 417 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 CELA2AP08217 269 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 CYC1P08574 325 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 ZNF17P17021 662 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 RAB5AP20339 215 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 GLRA1P23415 457 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 EIF1P41567 113 aaKnown RBP9.99□□□□□ -0.81
USF1-201ENST00000368019 TMEM33P57088 247 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 FOXF1Q12946 379 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 PCOLCEQ15113 449 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 GUK1Q16774 197 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 HYAL4Q2M3T9 481 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 GGNBP1Q5YKI7 109 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 SULF2Q8IWU5 870 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 OR51T1Q8NGJ9 327 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 C2CD4CQ8TF44 421 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 IMMP1LQ96LU5 166 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 CLCC1Q96S66 551 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 VN1R1Q9GZP7 353 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 CHST5Q9GZS9 411 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 ZNF700Q9H0M5 742 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 RPS10P5Q9NQ39 176 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 MED29Q9NX70 200 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 PLA2G2EQ9NZK7 142 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 ABI3Q9P2A4 366 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 C2CD3Q4AC94 2353 aa9.99□□□□□ -0.81
USF1-201ENST00000368019 IGKV1-9A0A0C4DH69 117 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 AP4M1O00189 453 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 WRBO00258 174 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 DHRS3O75911 302 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 IFNA17P01571 189 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 SFTPBP07988 381 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 HOXB5P09067 269 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 OR8U9P0C7N5 309 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 ZNF43P17038 809 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 ACKR3P25106 362 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 GRNP28799 593 aaKnown RBP9.98□□□□□ -0.81
USF1-201ENST00000368019 BLVRBP30043 206 aaPredicted RBP9.98□□□□□ -0.81
USF1-201ENST00000368019 OTX1P32242 354 aaPredicted RBP9.98□□□□□ -0.81
USF1-201ENST00000368019 ZNF41P51814 821 aaPredicted RBP9.98□□□□□ -0.81
USF1-201ENST00000368019 CD81P60033 236 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 HIST1H3AP68431 136 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 SRPXP78539 464 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 KISS1Q15726 138 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 PLPPR5Q32ZL2 321 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 C10orf128Q5T292 105 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 HIST2H3PS2Q5TEC6 136 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 CRIP3Q6Q6R5 217 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 PLXDC2Q6UX71 529 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 MCEMP1Q8IX19 187 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 ZNF283Q8N7M2 679 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 BHLHE23Q8NDY6 225 aa9.98□□□□□ -0.81
USF1-201ENST00000368019 OR8U1Q8NH10 309 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms