RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 AK3Q9UIJ7 227 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 HS3ST3B1Q9Y662 390 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF318Q5VUA4 2279 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 CDRT15L2A8MXV6 281 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 TRGC1P0CF51 173 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 EWSR1Q01844 656 aaKnown RBP eCLIP16.58■□□□□ 0.25
CMTM3-201ENST00000361909 ABCA11PQ4W5N1 156 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF343Q6P1L6 599 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF321PQ8N8H1 164 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 OR5L2Q8NGL0 311 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 OR2AJ1Q8NGZ0 328 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 OR2G3Q8NGZ4 309 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 GNPNAT1Q96EK6 184 aaPredicted RBP16.58■□□□□ 0.25
CMTM3-201ENST00000361909 ABHD14BQ96IU4 210 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 SYT3Q9BQG1 590 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 WDR54Q9H977 334 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 CHST11Q9NPF2 352 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 ANXA10Q9UJ72 324 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 DKKL1Q9UK85 242 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 WSB1Q9Y6I7 421 aa16.58■□□□□ 0.25
CMTM3-201ENST00000361909 DMDP11532 3685 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 TGIF2-C20orf24A0A0A6YYL0 155 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 IGKV1D-43A0A0B4J1Z2 117 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 A0A1B0GWJ7 208 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 C9J4A7 227 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 PRKNO60260 465 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-201ENST00000361909 H3F3AP84243 136 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 PLCXD2Q0VAA5 305 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 HLA-DQA1Q5Y7H0 255 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 MRPL14Q6P1L8 145 aaKnown RBP16.58■□□□□ 0.24
CMTM3-201ENST00000361909 RNF144BQ7Z419 303 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 DPPA2Q7Z7J5 298 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 CCDC54Q8NEL0 328 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 TMEM68Q96MH6 324 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 NDUFAF3Q9BU61 184 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 NECAP2Q9NVZ3 263 aa16.58■□□□□ 0.24
CMTM3-201ENST00000361909 NXT1Q9UKK6 140 aaKnown RBP16.58■□□□□ 0.24
CMTM3-201ENST00000361909 ZNF728P0DKX0 622 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 CCL4P13236 92 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 IL2RGP31785 369 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 SRPXP78539 464 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 HLA-DRB3P79483 266 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 POU3F1Q03052 451 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-201ENST00000361909 HNF4GQ14541 408 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 ICAM4Q14773 271 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 THEM4Q5T1C6 240 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 ANKRD37Q7Z713 158 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 PRR22Q8IZ63 422 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 ST8SIA1Q92185 356 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 GAL3ST4Q96RP7 486 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 HIST1H2BLQ99880 126 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 FOXD3Q9UJU5 478 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-201ENST00000361909 HSF4Q9ULV5 492 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 ALPK2Q86TB3 2170 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 FRYLO94915 3013 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 TRBV24-1A0A075B6N3 115 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 H0YL77 283 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 OR5H8P0DN80 308 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 DTYMKP23919 212 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 KISS1Q15726 138 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 LANCL3Q6ZV70 420 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 FBXL14Q8N1E6 418 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 OR6X1Q8NH79 312 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 ACTR3CQ9C0K3 210 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-201ENST00000361909 STRADBQ9C0K7 418 aa16.57■□□□□ 0.24
CMTM3-201ENST00000361909 RCL1Q9Y2P8 373 aaKnown RBP16.57■□□□□ 0.24
CMTM3-201ENST00000361909 A0A1W2PNV4 684 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 A8MWP6 167 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 ZNF732B4DXR9 585 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 XRCC2O43543 280 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 DIRAS3O95661 229 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 CDS2O95674 445 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 OR5AC1P0C628 307 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 ZNF17P17021 662 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 ATP6V0CP27449 155 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 ZNF121P58317 390 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-201ENST00000361909 TMEM176BQ3YBM2 270 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-201ENST00000361909 GFI1BQ5VTD9 330 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 OR2C3Q8N628 320 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 OR4D5Q8NGN0 318 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 OR14K1Q8NGZ2 314 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 RTN4IP1Q8WWV3 396 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-201ENST00000361909 FRZBQ92765 325 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 GPR179Q6PRD1 2367 aa16.56■□□□□ 0.24
CMTM3-201ENST00000361909 PHF3Q92576 2039 aaKnown RBP16.56■□□□□ 0.24
CMTM3-201ENST00000361909 CLDN34H7C241 214 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 TCAPO15273 167 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 CSNK1A1P48729 337 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 NHLH2Q02577 135 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 TLE3Q04726 772 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 TLE4Q04727 773 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 SHISA6Q6ZSJ9 500 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 TMEM183AQ8IXX5 376 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 CYB561D1Q8N8Q1 229 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 CCDC71LQ8N9Z2 235 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 ZPBPQ9BS86 351 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 ANGPTL4Q9BY76 406 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 POLR1DQ9Y2S0 133 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 LIPGQ9Y5X9 500 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 LHFPL6Q9Y693 200 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms