RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
LDB3-202ENST00000361373 TLE1Q04724 770 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 FAM162BQ5T6X4 162 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 OR52B4Q8NGK2 314 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 ADIPOR1Q96A54 375 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 ACY3Q96HD9 319 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 WDR13Q9H1Z4 485 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 OSGIN2Q9Y236 505 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 AGFG2O95081 481 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 CD80P33681 288 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 ZDBF2Q9HCK1 2354 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 IFNL4K9M1U5 179 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 TXNL1O43396 289 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 PDGFBP01127 241 aaPredicted RBP11.83□□□□□ -0.52
LDB3-202ENST00000361373 AKR1C3P42330 323 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 MAGEB1P43366 347 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 INSL4Q14641 139 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 ZNF239Q16600 458 aaKnown RBP11.83□□□□□ -0.52
LDB3-202ENST00000361373 LRRTM1Q86UE6 522 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 MDP1Q86V88 176 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 MOGAT3Q86VF5 341 aa11.83□□□□□ -0.52
LDB3-202ENST00000361373 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 TMPRSS2O15393 492 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 TMEM11P17152 192 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 SP6Q3SY56 376 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 ZBTB37Q5TC79 503 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 PCNPQ8WW12 178 aaKnown RBP11.82□□□□□ -0.52
LDB3-202ENST00000361373 NARFLQ9H6Q4 476 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 SOX15O60248 233 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 PDZK1IP1Q13113 114 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 BPIFCQ8NFQ6 507 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 GRAMD2BQ96HH9 432 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 FAM186AA6NE01 2351 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 HYAL3O43820 417 aaPredicted RBP11.82□□□□□ -0.52
LDB3-202ENST00000361373 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
LDB3-202ENST00000361373 HAGHQ16775 308 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 NPTNQ9Y639 398 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 TSTD3H0UI37 97 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 CDK2AP1O14519 115 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 COX7A1P24310 79 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 HOXA6P31267 233 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 MARVELD1Q9BSK0 173 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 PARP12Q9H0J9 701 aaKnown RBP11.82□□□□□ -0.52
LDB3-202ENST00000361373 GPR27Q9NS67 375 aa11.82□□□□□ -0.52
LDB3-202ENST00000361373 SEMG1P04279 462 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 COX6A1P12074 109 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 LIMS1P48059 325 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
LDB3-202ENST00000361373 SKA3Q8IX90 412 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 ZNF680Q8NEM1 530 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 AAMDCQ9H7C9 122 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 TMEM74BQ9NUR3 256 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 A0A1W2PNV4 684 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 DEFB108AA8MXU0 73 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 CST7O76096 145 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 ID4P47928 161 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 CSRP3P50461 194 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 MUC20Q8N307 709 aaPredicted RBP11.81□□□□□ -0.52
LDB3-202ENST00000361373 ZNF439Q8NDP4 499 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 TMEM147Q9BVK8 224 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 SLC25A4P12235 298 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 CEBPEQ15744 281 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 TMEM123Q8N131 208 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 UBALD1Q8TB05 177 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 SPSB2Q99619 263 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 LSM2Q9Y333 95 aaKnown RBP11.81□□□□□ -0.52
LDB3-202ENST00000361373 LOC285556D6RIA3 1793 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 H3BP45 60 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 PCOLCEQ15113 449 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 TEX30Q5JUR7 227 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 OR5B3Q8NH48 314 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 ABHD1Q96SE0 405 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 RBM38Q9H0Z9 239 aaKnown RBP11.81□□□□□ -0.52
LDB3-202ENST00000361373 BARX1Q9HBU1 254 aaPredicted RBP11.81□□□□□ -0.52
LDB3-202ENST00000361373 ZNF835Q9Y2P0 537 aa11.81□□□□□ -0.52
LDB3-202ENST00000361373 UPK3AO75631 287 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 OR4A8P0C604 315 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 CTSSP25774 331 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 SLC38A11Q08AI6 406 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 CRIPAKQ8N1N5 446 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 DUSP18Q8NEJ0 188 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 OR13D1Q8NGV5 346 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 PLPPR2Q96GM1 343 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 ZNF705GA8MUZ8 300 aaPredicted RBP11.8□□□□□ -0.52
LDB3-202ENST00000361373 CRHP06850 196 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 RPS4Y1P22090 263 aaKnown RBP11.8□□□□□ -0.52
LDB3-202ENST00000361373 Q56UQ5 140 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 TMEM104Q8NE00 496 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 NFAM1Q8NET5 270 aaPredicted RBP11.8□□□□□ -0.52
LDB3-202ENST00000361373 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 CACNG5Q9UF02 275 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 DSPPQ9NZW4 1301 aa11.8□□□□□ -0.52
LDB3-202ENST00000361373 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
LDB3-202ENST00000361373 ALX3O95076 343 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms