RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PXNP49023 591 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 CALHM1Q8IU99 346 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 SIGLEC11Q96RL6 698 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ALS2Q96Q42 1657 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 IGHV3-64DA0A0J9YX35 117 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 NSUN5P2Q63ZY6 315 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PARD6GQ9BYG4 376 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 COL11A1P12107 1806 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 LEUTXA8MZ59 168 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF324O75467 553 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 RAB9AP51151 201 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 RNPS1Q15287 305 aaKnown RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 SLC46A2Q9BY10 475 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ARG1P05089 322 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 OR10V1Q8NGI7 309 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 OOEPA6NGQ2 149 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 SPNP16150 400 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 C10orf113Q5VZT2 155 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 TCFL5Q9UL49 500 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 LEMD1Q68G75 181 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 BCL7CQ8WUZ0 217 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 MOB4Q9Y3A3 225 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 MDC1Q14676 2089 aaKnown RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 BTAF1O14981 1849 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SRSF10O75494 262 aaKnown RBP8.3□□□□□ -1.08
VPS13A-203ENST00000360280 RAB32Q13637 225 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 NRSN2Q9GZP1 204 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 MTFP1Q9UDX5 166 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 RAXQ9Y2V3 346 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 RER1O15258 196 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF519Q8TB69 540 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 VCX2Q9H322 139 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 GEMIN2O14893 280 aaKnown RBP8.3□□□□□ -1.08
VPS13A-203ENST00000360280 ASCL1P50553 236 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 KISS1Q15726 138 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 CDX2Q99626 313 aaPredicted RBP8.3□□□□□ -1.08
VPS13A-203ENST00000360280 PLPP2O43688 288 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF841Q6ZN19 808 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM174Q8WUU8 243 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 hADV38S2A0JD32 116 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SYNGR2O43760 224 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF384Q8TF68 577 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 PPT2Q9UMR5 302 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 NAT2P11245 290 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 FAM219AQ8IW50 185 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 FAM117AQ9C073 453 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 UQCR10Q9UDW1 63 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 MYBPHQ13203 477 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SSX8Q7RTT4 187 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS13A-203ENST00000360280 MT-ND6P03923 174 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 GUCA2AQ02747 115 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 ADAMTS17Q8TE56 1095 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 TMPRSS13Q9BYE2 586 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 CTAG2O75638 210 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 FBXL14Q8N1E6 418 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 COMPP49747 757 aaPredicted RBP8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SURF2Q15527 256 aaPredicted RBP8.3□□□□□ -1.08
VPS13A-203ENST00000360280 GBGT1Q8N5D6 347 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 FAM169BQ8N8A8 192 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 OR13G1Q8NGZ3 307 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 SP6Q3SY56 376 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 PHOSPHO2Q8TCD6 241 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 CES1P1Q9UKY3 287 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM272A0A1B0GTI8 110 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 A0A1W2PR48 441 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 GNG7O60262 68 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 TCTN3Q6NUS6 607 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 TEPPQ6URK8 271 aa8.3□□□□□ -1.08
VPS13A-203ENST00000360280 TCL1AP56279 114 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 DSCR4P56555 118 aaPredicted RBP8.29□□□□□ -1.08
VPS13A-203ENST00000360280 MRPL58Q14197 206 aaKnown RBP8.29□□□□□ -1.08
VPS13A-203ENST00000360280 MRGPRGQ86SM5 289 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM183AQ8IXX5 376 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 OR1N1Q8NGS0 311 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 TBX21Q9UL17 535 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 ST6GAL1P15907 406 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 LPAR6P43657 344 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 FIZ1Q96SL8 496 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF318Q5VUA4 2279 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 CSNK1EP49674 416 aaKnown RBP8.29□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF345Q14585 488 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 FAM78AQ5JUQ0 283 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 SLC37A2Q8TED4 501 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 ISOC2Q96AB3 205 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 IER3P46695 156 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
VPS13A-203ENST00000360280 ASCL5Q7RTU5 278 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 CA13Q8N1Q1 262 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 OR4C3Q8NH37 302 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 FCGR3BO75015 233 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 NTHL1P78549 312 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 SPANXN1Q5VSR9 72 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF107Q9UII5 783 aaPredicted RBP8.29□□□□□ -1.08
VPS13A-203ENST00000360280 FAM157CP0CG43 387 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms