RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 KIR2DS4P43632 304 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 RPS16P62249 146 aaKnown RBP5.96□□□□□ -1.45
RTN4-203ENST00000357376 S100A12P80511 92 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 RUNX1Q01196 453 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 KIR2DS1Q14954 304 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 TRIM61Q5EBN2 209 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 CDCP2Q5VXM1 449 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 CARFQ8N187 725 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 OR52M1Q8NGK5 317 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 OR10D3Q8NH80 312 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 SLC39A7Q92504 469 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 FAM117AQ9C073 453 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 WNT16Q9UBV4 365 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 BOKQ9UMX3 212 aaPredicted RBP5.96□□□□□ -1.45
RTN4-203ENST00000357376 TMED3Q9Y3Q3 217 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 WSB1Q9Y6I7 421 aa5.96□□□□□ -1.45
RTN4-203ENST00000357376 IGKV1D-8A0A087WSZ0 117 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 TRAV39A0A0B4J263 110 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 A0A1W2PNV4 684 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 SIRPB1O00241 398 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 EFNA2O43921 213 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 PPYP01298 95 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 RAC2P15153 192 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 RAB5AP20339 215 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 PPP1CCP36873 323 aaKnown RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 NOVA1P51513 510 aaKnown RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 DEFA6Q01524 100 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 EWSR1Q01844 656 aaKnown RBP eCLIP5.96□□□□□ -1.462e-7■■■□□ 18.2
RTN4-203ENST00000357376 HFEQ30201 348 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 IGSF11Q5DX21 431 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 TBC1D26Q86UD7 250 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 POC1BQ8TC44 478 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 ABHD3Q8WU67 409 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 ZNF837Q96EG3 531 aaPredicted RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 PLEKHF2Q9H8W4 249 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 KCNIP1Q9NZI2 227 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 GAB2Q9UQC2 676 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 OSGIN2Q9Y236 505 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 TPRP12270 2363 aaKnown RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 CEP250Q9BV73 2442 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 EIF3GO75821 320 aaKnown RBP eCLIP5.96□□□□□ -1.46
RTN4-203ENST00000357376 RAC1P63000 192 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 FIP1L1Q6UN15 594 aaKnown RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 ZNF429Q86V71 674 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 GNPNAT1Q96EK6 184 aaPredicted RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 THOC3Q96J01 351 aaKnown RBP5.96□□□□□ -1.46
RTN4-203ENST00000357376 CYYR1Q96J86 154 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 SLC39A9Q9NUM3 307 aa5.96□□□□□ -1.46
RTN4-203ENST00000357376 ADCYAP1P18509 176 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 EPHA8P29322 1005 aaPredicted RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 IL2RGP31785 369 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 UBE2NP61088 152 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 ZNF154Q13106 437 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 IL13RA2Q14627 380 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 DHRS7BQ6IAN0 325 aaPredicted RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 RBMS3Q6XE24 437 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 GAPTQ8N292 157 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 OR10AD1Q8NGE0 317 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 OR2V1Q8NHB1 315 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 FRZBQ92765 325 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 INTS12Q96CB8 462 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 HINT2Q9BX68 163 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 CDH20Q9HBT6 801 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 SLC7A10Q9NS82 523 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 LHX6Q9UPM6 363 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 CRYM-AS1A6NIL9 109 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ZNF727A8MUV8 499 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 MPPED1O15442 326 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 NXPH2O95156 264 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 GRPP07492 148 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 PRF1P14222 555 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ATP6V0CP27449 155 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 DYNLT3P51808 116 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 FGF8P55075 233 aaPredicted RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 SUPT4H1P63272 117 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 ARF1P84077 181 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 MRPL49Q13405 166 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 DCAF12Q5T6F0 453 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 WDFY1Q8IWB7 410 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ZDHHC23Q8IYP9 409 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 TDHQ8IZJ6 230 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ZNF808Q8N4W9 903 aaPredicted RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 MRPL13Q9BYD1 178 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 STRADBQ9C0K7 418 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 TGIF2Q9GZN2 237 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 MIOXQ9UGB7 285 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ERRFI1Q9UJM3 462 aaPredicted RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 RNF150Q9ULK6 438 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 STARD10Q9Y365 291 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 A0A0U1RQV5 110 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 DEGS1O15121 323 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 DFFBO76075 338 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 LIFP15018 202 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 HLA-GP17693 338 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 P2RY1P47900 373 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 HBG1P69891 147 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 HBG2P69892 147 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ZNF92Q03936 586 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 PRDX4Q13162 271 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms