RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PCDHGA9Q9Y5G4 932 aaKnown RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 PTPRFP10586 1907 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 IGHV3-64DA0A0J9YX35 117 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 A0A1B0GTQ1 180 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 OR5H15A6NDH6 313 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 LRRC3CA6NJW4 275 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 SPRY3O43610 288 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 ZP4Q12836 540 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 INPP5JQ15735 1006 aaPredicted RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 STUMQ69YW2 141 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 OR4S2Q8NH73 311 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 LANCL1O43813 399 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 OR5AC1P0C628 307 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 CEACAM3P40198 252 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 CD200P41217 278 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 ETV3LQ6ZN32 361 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 LRRTM1Q86UE6 522 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 BCL2L2Q92843 193 aaPredicted RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 SEBOXQ9HB31 216 aaPredicted RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 CACNG5Q9UF02 275 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 SCN2AQ99250 2005 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 ANKRD34CP0C6C1 535 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PRRX1P54821 245 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 C16orf47Q6ZP98 133 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-202ENST00000357250 C1orf210Q8IVY1 113 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 NUDT16L1Q9BRJ7 211 aaKnown RBP10.37□□□□□ -0.75
COL9A1-202ENST00000357250 ICE1Q9Y2F5 2266 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 B4DEV8 164 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 NTN1O95631 604 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 ERGP11308 486 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 FAM3AP98173 230 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PAX5Q02548 391 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 OR4F17Q8NGA8 305 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 MOB3AQ96BX8 217 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 ACY3Q96HD9 319 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 DUSP15Q9H1R2 295 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PLA2G3Q9NZ20 509 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF230Q9UIE0 474 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-202ENST00000357250 A0A1B0GTH9 108 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 FCGR3BO75015 233 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PNPP00491 289 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 OPN1MWP04001 364 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 OPN1MW2P0DN77 364 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 OPN1MW3P0DN78 364 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 GZMHP20718 246 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 CDC34P49427 236 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-202ENST00000357250 KLF9Q13886 244 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-202ENST00000357250 WDR73Q6P4I2 378 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 MOB3BQ86TA1 216 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 TM4SF19Q96DZ7 209 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 OPN4Q9UHM6 478 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 TCFL5Q9UL49 500 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PTP4A3O75365 173 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 HLA-GP17693 338 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 LRRC29Q8WV35 223 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM167BQ9NRX6 74 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 PSG11Q9UQ72 335 aa10.37□□□□□ -0.75
COL9A1-202ENST00000357250 J3QT63 122 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 MPGP29372 298 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 GNB2P62879 340 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 OR5I1Q13606 314 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 UBAC2Q8NBM4 344 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 PTPMT1Q8WUK0 201 aaPredicted RBP10.36□□□□□ -0.75
COL9A1-202ENST00000357250 ASB5Q8WWX0 329 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 TMPRSS13Q9BYE2 586 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 SYNGR2O43760 224 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM33P57088 247 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF345Q14585 488 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 HFEQ30201 348 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 LYG1Q8N1E2 194 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 OR10AD1Q8NGE0 317 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 RPEQ96AT9 228 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 FBXO17Q96EF6 278 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 LYRM2Q9NU23 88 aaPredicted RBP10.36□□□□□ -0.75
COL9A1-202ENST00000357250 C7orf66A4D0T2 115 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 OOEPA6NGQ2 149 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 ONECUT2O95948 504 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 FOXL2P58012 376 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 TNFAIP6P98066 277 aaPredicted RBP10.36□□□□□ -0.75
COL9A1-202ENST00000357250 GAB4Q2WGN9 574 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 DHRS13Q6UX07 377 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 CLEC18BQ6UXF7 455 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 OR5A2Q8NGI9 324 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 SCMH1Q96GD3 660 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 CHST5Q9GZS9 411 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 WDR13Q9H1Z4 485 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 ESRP2Q9H6T0 727 aaKnown RBP10.36□□□□□ -0.75
COL9A1-202ENST00000357250 CLCF1Q9UBD9 225 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 TRAPPC1Q9Y5R8 145 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 TTC28Q96AY4 2481 aa10.36□□□□□ -0.75
COL9A1-202ENST00000357250 A0A1W2PQF6 199 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 H0Y8G0 127 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms