RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 C17orf78Q8N4C9 275 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 DUXBA0A1W2PPF3 345 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 LINC01387J3KSC0 135 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 GREM1O60565 184 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 VASH2Q86V25 355 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 PTPMT1Q8WUK0 201 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 GPR27Q9NS67 375 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 DECR2Q9NUI1 292 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 STARD10Q9Y365 291 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 PMS2P1A4D2B8 440 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 EWSR1Q01844 656 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 C9orf50Q5SZB4 431 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 UNQ9370/PRO34162Q6UXP9 181 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 C10orf35Q96D05 121 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 GPR87Q9BY21 358 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 NAT8Q9UHE5 227 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 NAT8BQ9UHF3 227 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 M0R1X1 148 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 HPP00738 406 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 RCC1P18754 421 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 PMCHP20382 165 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 HNRNPA3P51991 378 aaKnown RBP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 RPS23P62266 143 aaKnown RBP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 SLC24A4Q8NFF2 622 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 RGP1Q92546 391 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 SNX22Q96L94 193 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 IP6K3Q96PC2 410 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 PCED1AQ9H1Q7 454 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 Q9N2K0 584 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 NPDC1Q9NQX5 325 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZNF638Q14966 1978 aaKnown RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 UPK3AO75631 287 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR2A4O95047 310 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 CNIH1O95406 144 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 TTRP02766 147 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 CST2P09228 141 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 SULT1A2P50226 295 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 SSX7Q7RTT5 188 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 NUFIP2Q7Z417 695 aaKnown RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 RFESDQ8TAC1 157 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 PLPPR2Q96GM1 343 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 LRRC3BQ96PB8 259 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR2A7Q96R45 310 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 ATP5SQ99766 215 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 EGLN1Q9GZT9 426 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 OCIAD1Q9NX40 245 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 PRSS50Q9UI38 385 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 ASXL3Q9C0F0 2248 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 LY86O95711 162 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 FSTP19883 344 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 CNN1P51911 297 aaKnown RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 ERVS71-1P61550 626 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 ATP6V1FQ16864 119 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 MPV17LQ2QL34 196 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR10A7Q8NGE5 316 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR2M5A3KFT3 312 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 FOXS1O43638 330 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 MESP2Q0VG99 397 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 VAX1Q5SQQ9 334 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 GPX7Q96SL4 187 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 SARGQ9BW04 601 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 TLNRD1Q9H1K6 362 aa13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 ESRP2Q9H6T0 727 aaKnown RBP13.75□□□□□ -0.21
TRAPPC11-202ENST00000357207 C2CD4DB7Z1M9 353 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 SOX15O60248 233 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 ADH4P08319 380 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 CA6P23280 308 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 BPIFB3P59826 476 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 PACRGQ96M98 296 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 AMELYQ99218 206 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 STRCP1A6NGW2 1772 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 SLC22A20A6NK97 555 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 SPINT1O43278 529 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 FAM78BQ5VT40 261 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 K7EQS6 105 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 HLA-GP17693 338 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 ATP6V0CP27449 155 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZNF154Q13106 437 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 ETV3LQ6ZN32 361 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 TMEM147Q9BVK8 224 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR5AC2Q9NZP5 309 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 NKX2-6A6NCS4 301 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 RAC3P60763 192 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZXDAP98168 799 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 FAM3AP98173 230 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 HYAL1Q12794 435 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 SLC26A1Q9H2B4 701 aa13.74□□□□□ -0.21
TRAPPC11-202ENST00000357207 VAX2Q9UIW0 290 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms