RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 AZGP1P25311 298 aaKnown RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 ERP29P30040 261 aaKnown RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 NPBWR2P48146 333 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 ZNF85Q03923 595 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 SCN1BQ07699 218 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 PDZK1IP1Q13113 114 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 ZNF146Q15072 292 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 HIST2H2BDQ6DRA6 164 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 CCBE1Q6UXH8 406 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 UTS2BQ765I0 119 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 CENPVQ7Z7K6 275 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 RTN4RL2Q86UN3 420 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 Q8N2B8 174 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 TPRX1Q8N7U7 411 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 OR52N4Q8NGI2 321 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 OR13C3Q8NGS6 347 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 OR2G2Q8NGZ5 317 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 ZNF596Q8TC21 504 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 SGCDQ92629 289 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 SPSB1Q96BD6 273 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 RNFT2Q96EX2 444 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 EXOSC4Q9NPD3 245 aaKnown RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 RBFOX1Q9NWB1 397 aaKnown RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-204ENST00000356316 HHLA2Q9UM44 414 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 GSTK1Q9Y2Q3 226 aa8.59□□□□□ -1.03
CAPN3-204ENST00000356316 SAC3D1A6NKF1 404 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 LEUTXA8MZ59 168 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 J3QLW9 94 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 SIRPB1O00241 398 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 SLC16A6O15403 523 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 ENTPD6O75354 484 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 RPSAP08865 295 aaKnown RBP8.58□□□□□ -1.04
CAPN3-204ENST00000356316 HTR1AP08908 422 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 ZNF19P17023 458 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 CEACAM3P40198 252 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 KIR3DL2P43630 455 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 PRRX1P54821 245 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 P2RX3P56373 397 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 BLCAPP62952 87 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 ZNF91Q05481 1191 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 FBLN7Q53RD9 439 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 MEDAGQ5VYS4 303 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 ABHD12Q8N2K0 398 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 CREB3L1Q96BA8 519 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 ADAT3Q96EY9 351 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-204ENST00000356316 OPALINQ96PE5 141 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 RHOFQ9HBH0 211 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 HMG20AQ9NP66 347 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 DPM3Q9P2X0 92 aa8.58□□□□□ -1.04
CAPN3-204ENST00000356316 PLXNB1O43157 2135 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 IGKV1-9A0A0C4DH69 117 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 DEGS1O15121 323 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 PSPNO60542 156 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 ZNF44P15621 663 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 OR3A1P47881 315 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 CCR9P51686 369 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 ISL1P61371 349 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 AESQ08117 197 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 LDLRAD2Q5SZI1 272 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 FDX2Q6P4F2 183 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 C16orf82Q7Z2V1 217 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 ACBD7Q8N6N7 88 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 OR5AU1Q8NGC0 362 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 OR4D6Q8NGJ1 314 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 RFT1Q96AA3 541 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 MBOAT4Q96T53 435 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 CITED2Q99967 270 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-204ENST00000356316 MMP28Q9H239 520 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 TAS2R3Q9NYW6 316 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 IL36RNQ9UBH0 155 aa8.57□□□□□ -1.04
CAPN3-204ENST00000356316 MAGEB3O15480 346 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 OR2H2O95918 312 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 HCKP08631 526 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 TMEM225BP0DP42 221 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 PF4V1P10720 104 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 CD33P20138 364 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 CDK2P24941 298 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 MNDAP41218 407 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 SNRPGP62308 76 aaKnown RBP8.56□□□□□ -1.04
CAPN3-204ENST00000356316 ZIK1Q3SY52 487 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-204ENST00000356316 OXLD1Q5BKU9 147 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 KRBOX4Q5JUW0 171 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 SLC25A30Q5SVS4 291 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 KPRPQ5T749 579 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-204ENST00000356316 PRAMEF5Q5TYX0 476 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 HEPN1Q6WQI6 88 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 TCF23Q7RTU1 214 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 SERPINA12Q8IW75 414 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 C10orf67Q8IYJ2 551 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 SAXO1Q8IYX7 474 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 ZNF565Q8N9K5 539 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 CHST4Q8NCG5 386 aa8.56□□□□□ -1.04
CAPN3-204ENST00000356316 OR5D18Q8NGL1 313 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms