RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TAAR3PQ9P1P4 343 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM30CPA0ZSE6 113 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 APELAP0DMC3 54 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 MAS1LP35410 378 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 LGALSLQ3ZCW2 172 aaPredicted RBP7.2□□□□□ -1.26
SCN8A-201ENST00000354534 FAM74A3Q4VXF1 159 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 STAC2Q6ZMT1 411 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 RAB1BQ9H0U4 201 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM129A0AVI4 362 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 MEX3AA1L020 520 aaKnown RBP7.2□□□□□ -1.26
SCN8A-201ENST00000354534 ZNF766Q5HY98 468 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM70Q9BUB7 260 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 OCIAD1Q9NX40 245 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 GFRA2O00451 464 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 GALNSP34059 522 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 NTHL1P78549 312 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 FABP5Q01469 135 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 ROM1Q03395 351 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 COX19Q49B96 90 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 ZNF384Q8TF68 577 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 GDE1Q9NZC3 331 aa7.2□□□□□ -1.26
SCN8A-201ENST00000354534 C3orf85A0A1B0GTC6 90 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 C9orf170A2RU37 121 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 MT-ND6P03923 174 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 DRD1P21728 446 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 HOXC13P31276 330 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SLC35E3Q7Z769 313 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SGMS2Q8NHU3 365 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FAM174AQ8TBP5 190 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 NEURL3Q96EH8 262 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 KLK15Q9H2R5 256 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 TRIP12Q14669 1992 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 KIR2DS2P43631 304 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 DLX6P56179 175 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 YBX1P67809 324 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SLCO1C1Q9NYB5 712 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 CES1P1Q9UKY3 287 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 MPDZO75970 2070 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 NRG2O14511 850 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SMAD6O43541 496 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FCMRO60667 390 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 IGHV3-13P01766 116 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 IGHV3-7P01780 117 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 MMP9P14780 707 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 IL10RAQ13651 578 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 NIT1Q86X76 327 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 RAB1CQ92928 201 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 CACNG5Q9UF02 275 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 LRRC37A3O60309 1634 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 IGHV3OR16-12A0A075B7B8 117 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 OR5AC1P0C628 307 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 GZMKP49863 264 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 ASCL3Q9NQ33 180 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FZR1Q9UM11 496 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FANCMQ8IYD8 2048 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 INSM1Q01101 510 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 ZNF750Q32MQ0 723 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM99Q8N816 258 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SYT8Q8NBV8 401 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 EAF1Q96JC9 268 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 GNG7O60262 68 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 LPAR6P43657 344 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 RGS7BPQ6MZT1 257 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 LYPD8Q6UX82 237 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 DDA1Q9BW61 102 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SIRT5Q9NXA8 310 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 A4GNTQ9UNA3 340 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 AMMECR1Q9Y4X0 333 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SCN11AQ9UI33 1791 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PPIHO43447 177 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PRKNO60260 465 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PMELP40967 661 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 ST3GAL2Q16842 350 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SPRED3Q2MJR0 410 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FAM109BQ6ICB4 259 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 ZNF562Q6V9R5 426 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 GLDNQ6ZMI3 551 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 HCFC1R1Q9NWW0 138 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FURINP09958 794 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 FKBP2P26885 142 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 APOBEC1P41238 236 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PDCD1Q15116 288 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 KHDC3LQ587J8 217 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 MOGAT3Q86VF5 341 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 SMIM19Q96E16 107 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 ELF5Q9UKW6 265 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 CLDN16Q9Y5I7 305 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 DDX60Q8IY21 1712 aaKnown RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 LEUTXA8MZ59 168 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM262E9PQX1 116 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 RER1O15258 196 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PNLIPRP3Q17RR3 467 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 EMC4Q5J8M3 183 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 OR5AN1Q8NGI8 311 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms