RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 HIST1H1BP16401 226 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZNF17P17021 662 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 PPP1CCP36873 323 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 RBP2P50120 134 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 THEM4Q5T1C6 240 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CDPF1Q6NVV7 123 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CRIP3Q6Q6R5 217 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 Q6ZSR3 168 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 TMPRSS7Q7RTY8 843 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 METTL27Q8N6F8 245 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 OR2AJ1Q8NGZ0 328 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 STT3BQ8TCJ2 826 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 TSLPQ969D9 159 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SLAMF9Q96A28 289 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SGK3Q96BR1 496 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZDHHC12Q96GR4 267 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CYYR1Q96J86 154 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 C18orf12Q96KH6 178 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 GPER1Q99527 375 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZNF2Q9BSG1 426 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 WWTR1Q9GZV5 400 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CHRNA10Q9GZZ6 450 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 PRDM13Q9H4Q3 707 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 NAA60Q9H7X0 242 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 GPR84Q9NQS5 396 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 GFOD1Q9NXC2 390 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 PADI1Q9ULC6 663 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZDHHC8Q9ULC8 765 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 KCNIP3Q9Y2W7 256 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ASCC3Q8N3C0 2202 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CABIN1Q9Y6J0 2220 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 IGKV1D-8A0A087WSZ0 117 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 RBFOX3A6NFN3 312 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 LIPT2A6NK58 231 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 H3BQ15 152 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 HSD17B6O14756 317 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 IGLV3-1P01715 115 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SRP19P09132 144 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 FTH1P19P0C7X4 201 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZNF43P17038 809 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CTSSP25774 331 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 HOXA6P31267 233 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ADMP35318 185 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 BIDP55957 195 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZNF121P58317 390 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 RAB4BP61018 213 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 POU3F1Q03052 451 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 TLE3Q04726 772 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SPSB3Q6PJ21 355 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SLC25A47Q6Q0C1 308 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 PLXDC2Q6UX71 529 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ABHD12BQ7Z5M8 362 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SLC22A18ASQ8N1D0 253 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SLC38A9Q8NBW4 561 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 APCDD1LQ8NCL9 501 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ADPRHL1Q8NDY3 354 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CCDC54Q8NEL0 328 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 MAFIPQ8WZ33 124 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 CPNE4Q96A23 557 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 RAB39BQ96DA2 213 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 MARS2Q96GW9 593 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 C14orf144Q96I85 54 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 FAM71F1Q96KD3 344 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SOX7Q9BT81 388 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 SH3BGRL3Q9H299 93 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 HIPK2Q9H2X6 1198 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 UCK1Q9HA47 277 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 PNRC2Q9NPJ4 139 aaKnown RBP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 MED29Q9NX70 200 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ALKBH4Q9NXW9 302 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ZNF319Q9P2F9 582 aa6.53□□□□□ -1.36
C11orf54-202ENST00000354421 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
C11orf54-202ENST00000354421 ATG2BQ96BY7 2078 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 NSG1A0A0A6YYJ2 146 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 ZNF724A8MTY0 619 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 ETV2O00321 342 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-202ENST00000354421 SCGB1D2O95969 90 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 GIMD1P0DJR0 217 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 PAX1P15863 534 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 DTYMKP23919 212 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 DUSP1P28562 367 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 TAGLN2P37802 199 aaKnown RBP6.52□□□□□ -1.37
C11orf54-202ENST00000354421 FHITP49789 147 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 ZNF133P52736 654 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-202ENST00000354421 UBE2KP61086 200 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 PKIAP61925 76 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 GRB2P62993 217 aaKnown RBP6.52□□□□□ -1.37
C11orf54-202ENST00000354421 ELOBQ15370 118 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 KISS1Q15726 138 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 C14orf28Q4W4Y0 310 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 ZNF506Q5JVG8 444 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 LCN10Q6JVE6 187 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 CLEC9AQ6UXN8 241 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 TMEM182Q6ZP80 229 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-202ENST00000354421 C1QL2Q7Z5L3 287 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 COMMD2Q86X83 199 aa6.52□□□□□ -1.37
C11orf54-202ENST00000354421 STX12Q86Y82 276 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms