RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 LINC00614P0C842 121 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 EPHA1P21709 976 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 TDGF1P3P51864 188 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 ERVFC1-1P60608 527 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 ABCA11PQ4W5N1 156 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 C4orf17Q53FE4 359 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 UBE2ZQ9H832 354 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-202ENST00000351691 NECAP2Q9NVZ3 263 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 THADAQ6YHU6 1953 aa13.02□□□□□ -0.33
TRAF3-202ENST00000351691 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 HLA-DOBP13765 273 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 MMP9P14780 707 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 UCP3P55916 312 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 IQCJQ1A5X6 159 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 P2RX4Q99571 388 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 CABLES2Q9BTV7 478 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 SDF2L1Q9HCN8 221 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF701Q9NV72 531 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 ALPK2Q86TB3 2170 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 IGKV1D-43A0A0B4J1Z2 117 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 LMO7DNF2Z398 122 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 ETV2O00321 342 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 DBHP09172 617 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF17P17021 662 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 DTYMKP23919 212 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 APLNRP35414 380 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 MTCP1P56278 107 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 SRPXP78539 464 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 ZFP36L1Q07352 338 aaKnown RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 BAXQ07812 192 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 MAML2Q8IZL2 1156 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 OR8B12Q8NGG6 310 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 HAS2Q92819 552 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 TSLPQ969D9 159 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 CYYR1Q96J86 154 aa13.01□□□□□ -0.33
TRAF3-202ENST00000351691 MCTS1Q9ULC4 181 aaKnown RBP13.01□□□□□ -0.33
TRAF3-202ENST00000351691 IGKV1-9A0A0C4DH69 117 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 IGSF23A1L1A6 192 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 PPP5D1E7EU14 171 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 DLEU1O43261 78 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 HNRNPKP61978 463 aaKnown RBP eCLIP13□□□□□ -0.33
TRAF3-202ENST00000351691 H1FOOQ8IZA3 346 aaPredicted RBP13□□□□□ -0.33
TRAF3-202ENST00000351691 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM265A0A087WTH1 108 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM210A6NLX4 147 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
TRAF3-202ENST00000351691 PRKNO60260 465 aaPredicted RBP13□□□□□ -0.33
TRAF3-202ENST00000351691 NUDT14O95848 222 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 G0S2P27469 103 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 OR1D4P47884 311 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 ARL4DP49703 201 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 KISS1Q15726 138 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 SP6Q3SY56 376 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 CRIP3Q6Q6R5 217 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 H1FNTQ75WM6 255 aaPredicted RBP13□□□□□ -0.33
TRAF3-202ENST00000351691 SLC35G3Q8N808 338 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 NAXEQ8NCW5 288 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 CADM4Q8NFZ8 388 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 GPR119Q8TDV5 335 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 GAL3ST4Q96RP7 486 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 ATG101Q9BSB4 218 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 LYRM2Q9NU23 88 aaPredicted RBP13□□□□□ -0.33
TRAF3-202ENST00000351691 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 GOLT1BQ9Y3E0 138 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
TRAF3-202ENST00000351691 DNAH14Q0VDD8 3507 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 VCANP13611 3396 aa13□□□□□ -0.33
TRAF3-202ENST00000351691 PHF3Q92576 2039 aaKnown RBP12.99□□□□□ -0.33
TRAF3-202ENST00000351691 FAM24AA6NFZ4 105 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-202ENST00000351691 FBLP22087 321 aaKnown RBP12.99□□□□□ -0.33
TRAF3-202ENST00000351691 COL10A1Q03692 680 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 PLCXD2Q0VAA5 305 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 ACSF3Q4G176 576 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-202ENST00000351691 C1orf194Q5T5A4 169 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 CCDC71LQ8N9Z2 235 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM18Q96B42 140 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 VN1R1Q9GZP7 353 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 WWTR1Q9GZV5 400 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 CALHM2Q9HA72 323 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 SEMA5BQ9P283 1151 aa12.99□□□□□ -0.33
TRAF3-202ENST00000351691 KIR2DL5BA0A0G2JN68 375 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 KIR2DL5BA0A0G2JPC4 375 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 WISP1O95388 367 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 FOSL2P15408 326 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 SMAD4Q13485 552 aaKnown RBP12.98□□□□□ -0.33
TRAF3-202ENST00000351691 COMMD2Q86X83 199 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 PRR22Q8IZ63 422 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 KIR2DL5AQ8N109 375 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF283Q8N7M2 679 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 OR1N1Q8NGS0 311 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 RLN3Q8WXF3 142 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 HIST1H2AAQ96QV6 131 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 SPIN2AQ99865 258 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 SPIN2BQ9BPZ2 258 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 LIME1Q9H400 295 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms