RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 BEX1Q9HBH7 125 aa18.18■□□□□ 0.5
TSPAN3-202ENST00000346495 VSTM5A8MXK1 200 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 DEGS1O15121 323 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 RLN1P04808 185 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 CBX3Q13185 183 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 ZNF146Q15072 292 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 MPPED2Q15777 294 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 SPIN3Q5JUX0 258 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 WDR82Q6UXN9 313 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 ZNF826PQ6ZT77 177 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 TMEM17Q86X19 198 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 SUMF2Q8NBJ7 301 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 MED30Q96HR3 178 aa18.17■□□□□ 0.5
TSPAN3-202ENST00000346495 BOLA2-SMG1P6H3BVE0 249 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ANXA7P20073 488 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ZNF81P51508 661 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ARPC4P59998 168 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 RBM39Q14498 530 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 CDK10Q15131 360 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 Q6P435 159 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 GLDNQ6ZMI3 551 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 GALNT11Q8NCW6 608 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 PRR7Q8TB68 274 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 NEK7Q8TDX7 302 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 MED28Q9H204 178 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 GPN1Q9HCN4 374 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 UFSP2Q9NUQ7 469 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 C1orf123Q9NWV4 160 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ANXA10Q9UJ72 324 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ATRXP46100 2492 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 TMEM82A0PJX8 343 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 SH2D1BO14796 132 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 SPRY3O43610 288 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ZNF44P15621 663 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 TSPAN5P62079 268 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ST3GAL2Q16842 350 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 C11orf91Q3C1V1 193 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ADAM5Q6NVV9 412 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ZDHHC22Q8N966 263 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 OR6F1Q8NGZ6 308 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 PLPPR2Q96GM1 343 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 MEGF10Q96KG7 1140 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 PPA2Q9H2U2 334 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ZNF286AQ9HBT8 521 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 CHMP1AQ9HD42 196 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 EHFQ9NZC4 300 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 GLS2Q9UI32 602 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 ZDHHC8Q9ULC8 765 aa18.16■□□□□ 0.5
TSPAN3-202ENST00000346495 CADP27708 2225 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 IGKV1D-8A0A087WSZ0 117 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 TRAV24A0A0B4J272 114 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 hCG_1807616A0A1W2PRN6 198 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 FAM221AA4D161 298 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 GRK1Q15835 563 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 ADIPOQQ15848 244 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 SRSF7Q16629 238 aaKnown RBP eCLIP18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 C4orf17Q53FE4 359 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 OVCH2Q7RTZ1 564 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 SLC36A1Q7Z2H8 476 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 OR10Z1Q8NGY1 313 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 TERB2Q8NHR7 220 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 LINC01560Q8TB33 94 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 CCDC107Q8WV48 283 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 OR2V2Q96R30 315 aa18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 DPCDQ9BVM2 203 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 ALX4Q9H161 411 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 RIMS4Q9H426 269 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-202ENST00000346495 C3orf80F5H4A9 247 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 HS3ST1O14792 307 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 CD3EP07766 207 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 OR4A8P0C604 315 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 GLRA1P23415 457 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 TNFSF4P23510 183 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 GMFBP60983 142 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 CDSNQ15517 529 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 CD276Q5ZPR3 534 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 FN3KRPQ9HA64 309 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 MYOZ1Q9NP98 299 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 ETAA1Q9NY74 926 aa18.14■□□□□ 0.49
TSPAN3-202ENST00000346495 SNRPGP15A8MWD9 76 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 SHISA9B4DS77 424 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 HSPB6O14558 160 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 OR2H2O95918 312 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 NAPSAO96009 420 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 VSIG10L2P0DP72 767 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 GRNP28799 593 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 CFHR2P36980 270 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 SNTB1Q13884 538 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 ATPAF1Q5TC12 328 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 ACP7Q6ZNF0 438 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 LRRC29Q8WV35 223 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 RDH5Q92781 318 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 MRGPRFQ96AM1 343 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 ST6GAL2Q96JF0 529 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 SEC22CQ9BRL7 303 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 NECAP2Q9NVZ3 263 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 RASL12Q9NYN1 266 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 ZNF221Q9UK13 617 aa18.13■□□□□ 0.49
TSPAN3-202ENST00000346495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 OR2AT4A6NND4 320 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms