RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 B4GALT1P15291 398 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 RUNX1Q01196 453 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 OR8B8Q15620 311 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 H1FOOQ8IZA3 346 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 IP6K3Q96PC2 410 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 RARRES2Q99969 163 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 LRFN3Q9BTN0 628 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 FLRT3Q9NZU0 649 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 NRG2O14511 850 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 NEURL1O76050 574 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 VDAC1P21796 283 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 MDH2P40926 338 aaKnown RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 OR13H1Q8NG92 308 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 MRGPRX4Q96LA9 322 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 COMMD5Q9GZQ3 224 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 BARX1Q9HBU1 254 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 IFITM10A6NMD0 228 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 PITX3O75364 302 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 DEDDO75618 318 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 FAM87AP0C7U9 286 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 VSIG8P0DPA2 414 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 CHRNB4P30926 498 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 ZNF117Q03924 483 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 MRPL58Q14197 206 aaKnown RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 MESTQ5EB52 335 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 TSEN54Q7Z6J9 526 aaKnown RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 ECM29Q5VYK3 1845 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 CCL4L1Q8NHW4 92 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 ZNF707Q96C28 371 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-202ENST00000345356 WFIKKN1Q96NZ8 548 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 LRRC3BQ96PB8 259 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 OR6C1Q96RD1 312 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 IL23AQ9NPF7 189 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 CACFD1Q9UGQ2 172 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 BCORQ6W2J9 1755 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 PDE6DO43924 150 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 CDS2O95674 445 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 HKR1P10072 659 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 PLP1P60201 277 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 AQP10Q96PS8 301 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 A0A096LPE4 126 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 A0A1W2PPZ6 126 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 SRP14P37108 136 aaKnown RBP10.71□□□□□ -0.69
COL12A1-202ENST00000345356 OR10V1Q8NGI7 309 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 RNF186Q9NXI6 227 aa10.71□□□□□ -0.69
COL12A1-202ENST00000345356 LRP5O75197 1615 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 OR2M5A3KFT3 312 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 NDUFB7P17568 137 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 PRDX4Q13162 271 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 RTL8BQ17RB0 113 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 Q6ZNB5 142 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 PGLYRP3Q96LB9 341 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 C12orf49Q9H741 205 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 DSPPQ9NZW4 1301 aa10.71□□□□□ -0.7
COL12A1-202ENST00000345356 EIF4E3Q8N5X7 224 aaKnown RBP10.71□□□□□ -0.7
COL12A1-202ENST00000345356 PRRT4C9JH25 899 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 APCSP02743 223 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 ADH4P08319 380 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 CEACAM6P40199 344 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 PRICKLE4Q2TBC4 344 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 ZNF343Q6P1L6 599 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 YRDCQ86U90 279 aaKnown RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 CLEC3BP05452 202 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 PPP1CCP36873 323 aaKnown RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 TRAT1Q6PIZ9 186 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 SPNS3Q6ZMD2 512 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 STARD10Q9Y365 291 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 GCM2O75603 506 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 H1FXQ92522 213 aaKnown RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 EVPLQ92817 2033 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 FGF14Q92915 247 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 OR51B4Q9Y5P0 310 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 MRPS18BQ9Y676 258 aaKnown RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 SLC25A5P05141 298 aaKnown RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 RTL10Q7L3V2 364 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 EDARADDQ8WWZ3 215 aa10.7□□□□□ -0.7
COL12A1-202ENST00000345356 ADAT3Q96EY9 351 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-202ENST00000345356 CD1AP06126 327 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-202ENST00000345356 RPS4Y1P22090 263 aaKnown RBP10.69□□□□□ -0.7
COL12A1-202ENST00000345356 LIMS1P48059 325 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 CTAG1AP78358 180 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 ZNF718Q3SXZ3 478 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 TMEM183AQ8IXX5 376 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 LINC01555Q8NAE3 123 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 KCNK7Q9Y2U2 307 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 SDK1Q7Z5N4 2213 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 KIAA1551Q9HCM1 1747 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 A6NCN8 305 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 SHISA8B8ZZ34 492 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 H0YIG0 161 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 RND3P61587 244 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 INSM1Q01101 510 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-202ENST00000345356 MYBPHQ13203 477 aa10.69□□□□□ -0.7
COL12A1-202ENST00000345356 SCCPDHQ8NBX0 429 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 359.6 ms