RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 AKR1C4P17516 323 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 HRH1P35367 487 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 PTGER4P35408 488 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 KIR2DL2P43627 348 aaPredicted RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 QRFPP83859 136 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 FAM3AP98173 230 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 SURF2Q15527 256 aaPredicted RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 KISS1Q15726 138 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 UBE2V2Q15819 145 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 HIKESHIQ53FT3 197 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 RTL6Q6ICC9 239 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 FAM180AQ6UWF9 173 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 UNQ6126/PRO20091Q6UXV3 157 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 Q6ZT83 130 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 ZNF101Q8IZC7 436 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 ACBD4Q8NC06 268 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 KCNG3Q8TAE7 436 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 APOBEC3DQ96AK3 386 aaPredicted RBP11.07□□□□□ -0.64
CLK3-201ENST00000345005 SPACA5Q96QH8 159 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 GHRLQ9UBU3 117 aa11.07□□□□□ -0.64
CLK3-201ENST00000345005 LAMA5O15230 3695 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 FIGNL2A6NMB9 653 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 LINC00587B1AMM8 73 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 WDR1O75083 606 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 SERPINA5P05154 406 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 CSN2P05814 226 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 FAM157CP0CG43 387 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 VSIG8P0DPA2 414 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 EDN3P14138 238 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 CCNOP22674 350 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 ACKR3P25106 362 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 APLNRP35414 380 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 ZNF92Q03936 586 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 MALLQ13021 153 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 PEA15Q15121 130 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 FAM76BQ5HYJ3 339 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 OR10K2Q6IF99 312 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 GLIPR1L1Q6UWM5 242 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 PAQR4Q8N4S7 273 aaPredicted RBP11.06□□□□□ -0.64
CLK3-201ENST00000345005 C15orf54Q8N8G6 183 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 OR4S1Q8NGB4 309 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 SPSB1Q96BD6 273 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 CPNE2Q96FN4 548 aaPredicted RBP11.06□□□□□ -0.64
CLK3-201ENST00000345005 POM121L2Q96KW2 1035 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 RNF126Q9BV68 326 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 GSN-AS1Q9NRJ2 163 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 CYTL1Q9NRR1 136 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 EDARQ9UNE0 448 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 GPR132Q9UNW8 380 aa11.06□□□□□ -0.64
CLK3-201ENST00000345005 MBD3L4A6NDZ8 208 aaPredicted RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 MBD3L3A6NE82 208 aaPredicted RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 MBD3L5A6NJ08 208 aaPredicted RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 TMEM14DPA8MWL7 114 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 IGHV1-2P23083 117 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 FPR2P25090 351 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 ALDH3B1P43353 468 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 UCNP55089 124 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 TAS2R46P59540 309 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 PDZK1IP1Q13113 114 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 UNC119Q13432 240 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 PPA1Q15181 289 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 CNN3Q15417 329 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 OR8B8Q15620 311 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 MOGAT2Q3SYC2 334 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 MBD3L2Q8NHZ7 208 aaPredicted RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 TECTBQ96PL2 329 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 OCSTAMPQ9BR26 566 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 RCC2Q9P258 522 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 TP53TG5Q9Y2B4 290 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 MFNGO00587 321 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 HTR3BO95264 441 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 NRASP01111 189 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 BTF3P20290 206 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 PTGFRP43088 359 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 OR3A4PP47883 348 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 ARHGDIBP52566 201 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 TMPRSS3P57727 454 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 UBE2NP61088 152 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 EIF2S3LQ2VIR3 472 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 TMEM42Q69YG0 159 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 FIP1L1Q6UN15 594 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 RNF144BQ7Z419 303 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 MDP1Q86V88 176 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 OR56B1Q8NGI3 324 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 NPRL2Q8WTW4 380 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 BOD1Q96IK1 185 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 MICU1Q9BPX6 476 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 NRIP2Q9BQI9 281 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 URM1Q9BTM9 101 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 TLNRD1Q9H1K6 362 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 OPA3Q9H6K4 179 aa11.05□□□□□ -0.64
CLK3-201ENST00000345005 ZMAT3Q9HA38 289 aaKnown RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 SEBOXQ9HB31 216 aaPredicted RBP11.05□□□□□ -0.64
CLK3-201ENST00000345005 RHOFQ9HBH0 211 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms