RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 AK6Q9Y3D8 172 aaKnown RBP17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 DEGS1O15121 323 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 SRD5A1P18405 259 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 MYL9P24844 172 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 C22orf42Q6IC83 251 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 GDPD3Q7L5L3 318 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 OR5D13Q8NGL4 314 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 PPP1R35Q8TAP8 253 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 CHST6Q9GZX3 395 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 SEBOXQ9HB31 216 aaPredicted RBP17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 ONECUT1Q9UBC0 465 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 SSR3Q9UNL2 185 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 ST3GAL6Q9Y274 331 aa17.21■□□□□ 0.35
SMARCB1-202ENST00000344921 GTF2F2P13984 249 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 CD36P16671 472 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 GALP22466 123 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 EDDM3BP56851 147 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 ARF6P62330 175 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 GRK1Q15835 563 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 PIGYQ3MUY2 71 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 C1orf229Q6ZS94 237 aaPredicted RBP17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 FAM185AQ8N0U4 392 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 OR4M1Q8NGD0 313 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 PLGRKTQ9HBL7 147 aa17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 NIPBLQ6KC79 2804 aaeCLIP17.2■□□□□ 0.34
SMARCB1-202ENST00000344921 ZNF737O75373 536 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 METTL11BQ5VVY1 283 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 C17orf107Q6ZR85 190 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 LYPD6Q86Y78 171 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 OR8H2Q8N162 312 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 OR51T1Q8NGJ9 327 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 NANPQ8TBE9 248 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 TBC1D15Q8TC07 691 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 PCGF1Q9BSM1 259 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 OPN4Q9UHM6 478 aa17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 ANK3Q12955 4377 aaKnown RBP17.19■□□□□ 0.34
SMARCB1-202ENST00000344921 TRBV23-1A0A0A0MS06 115 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 A0A1W2PP11 408 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 TMEM82A0PJX8 343 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 PSPNO60542 156 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 HTR2CP28335 458 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 RPL31P62899 125 aaKnown RBP17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 EDDM3AQ14507 147 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 Q8NFD4 153 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 OR51E2Q9H255 320 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 TXNL4BQ9NX01 149 aaKnown RBP17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 ZFHX3Q15911 3703 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 PDCD5O14737 125 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 CRTAPO75718 401 aaPredicted RBP17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 TOX4O94842 621 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 PSMD7P51665 324 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 IL13RA2Q14627 380 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 CMTM4Q8IZR5 234 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 CHST4Q8NCG5 386 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 LY6G5BQ8NDX9 201 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 CHCHD6Q9BRQ6 235 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 GHRLQ9UBU3 117 aa17.18■□□□□ 0.34
SMARCB1-202ENST00000344921 TRAV1-2A0A0B4J238 106 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 A0A0G2JK05 382 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 LOC100506127A0A0U1RQW1 187 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 HSPB6O14558 160 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 OR7C1O76099 320 aaPredicted RBP17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 FGF9P31371 208 aaPredicted RBP17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 RBM11P57052 281 aaKnown RBP17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 C1orf100Q5SVJ3 147 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 Q6P435 159 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 OR4S1Q8NGB4 309 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 OR6M1Q8NGM8 313 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 C8orf46Q8TAG6 207 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 FAM46BQ96A09 425 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 WDFY2Q96P53 400 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 PPA2Q9H2U2 334 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 BANF2Q9H503 90 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 C19orf12Q9NSK7 152 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 V9GY05 133 aa17.17■□□□□ 0.34
SMARCB1-202ENST00000344921 SLC33A1O00400 549 aaPredicted RBP17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 GEMIN2O14893 280 aaKnown RBP17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 FAM157CP0CG43 387 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 UBBP0CG47 229 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 GADD45AP24522 165 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 LMO1P25800 156 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 MRPS24Q96EL2 167 aaKnown RBP17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 GFI1Q99684 422 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 SELENOIQ9C0D9 397 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 CST11Q9H112 138 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 ING3Q9NXR8 418 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 A0A1W2PPH5 198 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 MGST3O14880 152 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 MGMTP16455 207 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 OR3A1P47881 315 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 TAF9Q16594 264 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 PAN3Q58A45 887 aaKnown RBP17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 NHLRC3Q5JS37 347 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 TPRX1Q8N7U7 411 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 DMRTB1Q96MA1 342 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 C1orf147Q96MC9 270 aaPredicted RBP17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 KPTNQ9Y664 436 aa17.16■□□□□ 0.34
SMARCB1-202ENST00000344921 SETD2Q9BYW2 2564 aaPredicted RBP17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 TRIM64CA6NLI5 447 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 SLC17A2O00624 439 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms