RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 KLF9Q13886 244 aaPredicted RBP13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 SMIM21Q3B7S5 101 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 BRICD5Q6PL45 260 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 TRAPPC6BQ86SZ2 158 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 OR11L1Q8NGX0 322 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 SPACA1Q9HBV2 294 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 TRAV24A0A0B4J272 114 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 ANKRD20A5PA0PJZ0 165 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 J3QKU1 62 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 DEGS1O15121 323 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 CLDN1O95832 211 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 ECDO95905 644 aaPredicted RBP13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 KNG1P01042 644 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 ACTBP60709 375 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 ACTG1P63261 375 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 TENM4Q6N022 2769 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 DCDC5Q6ZRR9 648 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 FAM90A1Q86YD7 464 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 AK3Q9UIJ7 227 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 NPTNQ9Y639 398 aa13.74□□□□□ -0.21
CEACAM1-202ENST00000344391 VGLL3A8MV65 326 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 SH2D1BO14796 132 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 OR2H2O95918 312 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 GLAP06280 429 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 ZNF44P15621 663 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 DYRK1AQ13627 763 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 TGIF2LYQ8IUE0 185 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 SUMF2Q8NBJ7 301 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 HPS1Q92902 700 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 VRK1Q99986 396 aaPredicted RBP13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 OCSTAMPQ9BR26 566 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 TRAF4Q9BUZ4 470 aaPredicted RBP13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 TAS2R8Q9NYW2 309 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 TREM2Q9NZC2 230 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 OR14J1Q9UGF5 321 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 ANAPC10Q9UM13 185 aa13.73□□□□□ -0.21
CEACAM1-202ENST00000344391 UBE2QL1A1L167 161 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 LYRM1O43325 122 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 HAND1O96004 215 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 CYB5R3P00387 301 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 HPXP02790 462 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 CSF1P09603 554 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 IRF2P14316 349 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 CBX5P45973 191 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 AP3S2P59780 193 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 GVQW1Q8N7I0 195 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 BOLLQ8N9W6 283 aaKnown RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 CHPT1Q8WUD6 406 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 COX4I2Q96KJ9 171 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 UBTD1Q9HAC8 227 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 SEBOXQ9HB31 216 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 NLKQ9UBE8 527 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 GLS2Q9UI32 602 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 ZNF107Q9UII5 783 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 CACNG2Q9Y698 323 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 DSCAMO60469 2012 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 RFPL4AA6NLU0 287 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 LRRC30A6NM36 301 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 MCRIP1C9JLW8 97 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 RFPL4AL1F8VTS6 287 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 SIRPB1O00241 398 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 SLC33A1O00400 549 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 PTTG1O95997 202 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 LMO1P25800 156 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 RCVRNP35243 200 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 OXA1LQ15070 435 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 FAM201AQ5SY85 155 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 GDPD3Q7L5L3 318 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 TMEM229BQ8NBD8 167 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 DYRK2Q92630 601 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 RDH5Q92781 318 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 C7orf50Q9BRJ6 194 aaKnown RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 DPCDQ9BVM2 203 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 DCAF16Q9NXF7 216 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 DNAJB11Q9UBS4 358 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
CEACAM1-202ENST00000344391 USP9YO00507 2555 aaPredicted RBP13.71□□□□□ -0.21
CEACAM1-202ENST00000344391 IFNL4K9M1U5 179 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 FCER2P06734 321 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 PSG2P11465 335 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 NAT1P18440 290 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 CD80P33681 288 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 RFX2P48378 723 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 CEBPDP49716 269 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 TLE4Q04727 773 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 RBM39Q14498 530 aaKnown RBP13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 SP5Q6BEB4 398 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 BPIFB2Q8N4F0 458 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 DEDD2Q8WXF8 326 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 HRASLSQ9HDD0 168 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 IFT46Q9NQC8 304 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 LAMP3Q9UQV4 416 aa13.71□□□□□ -0.22
CEACAM1-202ENST00000344391 HELZ2Q9BYK8 2649 aaKnown RBP13.7□□□□□ -0.22
CEACAM1-202ENST00000344391 IGKV1D-17A0A075B6S4 117 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms