RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 FAM90A14PP0C7W9 464 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 FAM90A24PP0C7X0 464 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 CD80P33681 288 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 SNRPD2P62316 118 aaKnown RBP10.69□□□□□ -0.7
CT55-202ENST00000344129 OR52W1Q6IF63 320 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 MZT2BQ6NZ67 158 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 GCSAMQ8N6F7 178 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 SUMF2Q8NBJ7 301 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 OR5T2Q8NGG2 359 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 VRK1Q99986 396 aaPredicted RBP10.69□□□□□ -0.7
CT55-202ENST00000344129 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 SAP30LQ9HAJ7 183 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 RHOFQ9HBH0 211 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 HRASLSQ9HDD0 168 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.69□□□□□ -0.7
CT55-202ENST00000344129 PPP1R3CQ9UQK1 317 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 LRBAP50851 2863 aa10.69□□□□□ -0.7
CT55-202ENST00000344129 TRAV24A0A0B4J272 114 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 A6NNC1 897 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 SRRM5B3KS81 715 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.68□□□□□ -0.7
CT55-202ENST00000344129 M0QYG6 137 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 OR2H2O95918 312 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 HAND1O96004 215 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 RCVRNP35243 200 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 AP3S2P59780 193 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ACTBP60709 375 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ACTG1P63261 375 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ARL6IP1Q15041 203 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 TESK1Q15569 626 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 LINC00596Q86U02 117 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 OR4D10Q8NGI6 311 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 OR10Z1Q8NGY1 313 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ENKURQ8TC29 256 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 NEK7Q8TDX7 302 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 CMSS1Q9BQ75 279 aaKnown RBP10.68□□□□□ -0.7
CT55-202ENST00000344129 EGLN1Q9GZT9 426 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 MMP28Q9H239 520 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 UBTD1Q9HAC8 227 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ZNF701Q9NV72 531 aaPredicted RBP10.68□□□□□ -0.7
CT55-202ENST00000344129 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 ING3Q9NXR8 418 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 RCC2Q9P258 522 aaKnown RBP10.68□□□□□ -0.7
CT55-202ENST00000344129 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
CT55-202ENST00000344129 FAM240BA0A1B0GVZ2 78 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 CENPXA8MT69 81 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 MCRIP1C9JLW8 97 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SH2D1BO14796 132 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 PFDN1O60925 122 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SOD3P08294 240 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 TNFRSF1AP19438 455 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 BTCP35070 178 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 CCR6P51684 374 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SSBP1Q04837 148 aaKnown RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 DYRK1AQ13627 763 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 ZNF146Q15072 292 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SMIM21Q3B7S5 101 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SPIN3Q5JUX0 258 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 FIP1L1Q6UN15 594 aaKnown RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 CCBE1Q6UXH8 406 aaPredicted RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 Q6ZNX1 250 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 OR4C16Q8NGL9 310 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 OR11L1Q8NGX0 322 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SNAPC3Q92966 411 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 POM121Q96HA1 1249 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 DPCDQ9BVM2 203 aaPredicted RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 MS4A5Q9H3V2 200 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 NLKQ9UBE8 527 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 DNAJB11Q9UBS4 358 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 DOPEY1Q5JWR5 2465 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 ABCA4P78363 2273 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 A1L4Q6 167 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 RFPL4AA6NLU0 287 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 RFPL4AL1F8VTS6 287 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 SLC33A1O00400 549 aaPredicted RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 LHBP01229 141 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 CD8AP01732 235 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 HPXP02790 462 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 CSN2P05814 226 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 GIFP27352 417 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 TAS2R19P59542 299 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 MRPS15P82914 257 aaKnown RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 PAN3Q58A45 887 aaKnown RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 FAM209AQ5JX71 171 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 STEAP1BQ6NZ63 245 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 TMEM229BQ8NBD8 167 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 Q8TCH9 128 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 OCSTAMPQ9BR26 566 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 TINAGL1Q9GZM7 467 aaPredicted RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 CHMP1AQ9HD42 196 aaPredicted RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 RASL12Q9NYN1 266 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 TAS2R8Q9NYW2 309 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 WIPI2Q9Y4P8 454 aa10.67□□□□□ -0.7
CT55-202ENST00000344129 KLF2Q9Y5W3 355 aaPredicted RBP10.67□□□□□ -0.7
CT55-202ENST00000344129 UTP20O75691 2785 aaKnown RBP10.66□□□□□ -0.7
CT55-202ENST00000344129 FAM208BQ5VWN6 2430 aa10.66□□□□□ -0.7
CT55-202ENST00000344129 DYSFO75923 2080 aa10.66□□□□□ -0.7
CT55-202ENST00000344129 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
CT55-202ENST00000344129 IGKV1D-8A0A087WSZ0 117 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms