RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CBFBQ13951 182 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 TMEM241Q24JQ0 296 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 PCGF3Q3KNV8 242 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 CPTPQ5TA50 214 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 AWAT2Q6E213 333 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 BTNL3Q6UXE8 466 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 CEACAM19Q7Z692 300 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 TMPRSS11BQ86T26 416 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 LYG1Q8N1E2 194 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 SLC35G3Q8N808 338 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 OR2D3Q8NGH3 330 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 Q8WTZ3 238 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 PPP1R1CQ8WVI7 109 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 LIPHQ8WWY8 451 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 ATP6V0BQ99437 205 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 RNF2Q99496 336 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 GSKIPQ9P0R6 139 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 RHCGQ9UBD6 479 aa6.31□□□□□ -1.4
ZNF540-202ENST00000343599 MCTS1Q9ULC4 181 aaKnown RBP6.31□□□□□ -1.4
ZNF540-202ENST00000343599 DCTN6O00399 190 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 SPRY1O43609 319 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 WNT11O96014 354 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 TRGC2P03986 189 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 HSD11B1P28845 292 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 CDC34P49427 236 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 SULT1A2P50226 295 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 IQCJQ1A5X6 159 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 COA6Q5JTJ3 125 aaKnown RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF468Q5VIY5 522 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 WDFY1Q8IWB7 410 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 LGALS14Q8TCE9 139 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 RGP1Q92546 391 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 NEIL2Q969S2 332 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 C20orf24Q9BUV8 137 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 OR2J1Q9GZK6 312 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 TMEM38AQ9H6F2 299 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 SYNPO2LQ9H987 977 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 LOC105371242A0A075B767 164 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 GXYLT2A0PJZ3 443 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF705GA8MUZ8 300 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 CCL22O00626 93 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ZIC3O60481 467 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 VAMP5O95183 116 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 TOMM40O96008 361 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 IFNA21P01568 189 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 CD3EP07766 207 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 CD55P08174 381 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 RAB7AP51149 207 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 PCBP3P57721 371 aaKnown RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF141Q15928 474 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ENTPD8Q5MY95 495 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 DCST1Q5T197 706 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 GRINAQ7Z429 371 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 GGNQ86UU5 652 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 MRPL41Q8IXM3 137 aaKnown RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 CLDN19Q8N6F1 224 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 OR4K17Q8NGC6 315 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 FRZBQ92765 325 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 TSSK3Q96PN8 268 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 OR10A5Q9H207 317 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ISG20L2Q9H9L3 353 aaKnown RBP6.3□□□□□ -1.4
ZNF540-202ENST00000343599 ACACAQ13085 2346 aa6.3□□□□□ -1.4
ZNF540-202ENST00000343599 SLC22A20A6NK97 555 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 UMAD1C9J7I0 102 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CCL3P10147 92 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 PGAM2P15259 253 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 MAGEA5P43359 124 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 TAS2R19P59542 299 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 RASGEF1BQ0VAM2 473 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 UBE2V1Q13404 147 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 RNF151Q2KHN1 245 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 DEFB110Q30KQ9 67 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 C18orf21Q32NC0 220 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-202ENST00000343599 FAM166AQ6J272 317 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 LINC01551Q86U37 167 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 C9orf106Q8NAJ2 232 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 OR4C16Q8NGL9 310 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 PRRT1Q99946 306 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CHST6Q9GZX3 395 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CHODLQ9H9P2 273 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 KCNG2Q9UJ96 466 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 DHRS7CA6NNS2 312 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 GPRIN2O60269 458 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 H1F0P07305 194 aaKnown RBP6.29□□□□□ -1.4
ZNF540-202ENST00000343599 DPP4P27487 766 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 COL8A1P27658 744 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CCKARP32238 428 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 SNCAP37840 140 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 PRPS1P60891 318 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 MYPOPQ86VE0 399 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CLECL1Q8IZS7 167 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 OR1L6Q8NGR2 347 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 OR5W2Q8NH69 310 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 OR14L1PQ8NHC6 308 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 TSLPQ969D9 159 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 TNFRSF13CQ96RJ3 184 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 PLK3Q9H4B4 646 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 TRIM36Q9NQ86 728 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 TAS2R8Q9NYW2 309 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 VAX2Q9UIW0 290 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms