RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 C9orf40Q8IXQ3 194 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 EIF4E3Q8N5X7 224 aaKnown RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 UCK1Q9HA47 277 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 LIPT2A6NK58 231 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 LRRC30A6NM36 301 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 DEFA4P12838 97 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 IL11P20809 199 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 PRDX4Q13162 271 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 TMPRSS7Q7RTY8 843 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 WFDC8Q8IUA0 241 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 ADAD2Q8NCV1 583 aaKnown RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 RFESDQ8TAC1 157 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 ASB5Q8WWX0 329 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 CLDN23Q96B33 292 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 ADGRG7Q96K78 797 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 PECRQ9BY49 303 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 OR51I2Q9H344 312 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 PIPOXQ9P0Z9 390 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 AUP1Q9Y679 476 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 AQP7P3A6NL99 342 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 F6UZH7 168 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 M0QZK8 103 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 GGCTO75223 188 aaKnown RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 BGLAPP02818 100 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 SPCS3P61009 180 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 SUMO1P63165 101 aaKnown RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 SPINK9Q5DT21 86 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 RASL10BQ96S79 203 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 ACTR3CQ9C0K3 210 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 RYDENQ9NUL5 291 aaKnown RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 BRWD3Q6RI45 1802 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 CTSBP07858 339 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 RCC1P18754 421 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 THBS3P49746 956 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 GAMTQ14353 236 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 LBHQ53QV2 105 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-202ENST00000343090 PLAC9Q5JTB6 97 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 NCR3LG1Q68D85 454 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 SPINK14Q6IE38 97 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 DHRS13Q6UX07 377 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 Q7L0L9 218 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 C17orf78Q8N4C9 275 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 PARP11Q9NR21 331 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 ATP23Q9Y6H3 246 aa7.12□□□□□ -1.27
UBE4B-202ENST00000343090 NPIPB9F8W1W9 429 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 CNIH1O95406 144 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 CRYAAP02489 173 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 CCL4P13236 92 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 EPHA8P29322 1005 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-202ENST00000343090 MGAT2Q10469 447 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 AARDQ4LEZ3 155 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 RHBDD2Q6NTF9 364 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 CLEC18BQ6UXF7 455 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 ATG101Q9BSB4 218 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 GPR61Q9BZJ8 451 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 NMES1Q9C002 83 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 CARHSP1Q9Y2V2 147 aaKnown RBP7.11□□□□□ -1.27
UBE4B-202ENST00000343090 SEC16AO15027 2179 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 RRP8O43159 456 aaKnown RBP7.11□□□□□ -1.27
UBE4B-202ENST00000343090 IL2RAP01589 272 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 IGHV3-13P01766 116 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 IGHV3-7P01780 117 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 APOA2P02652 100 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 BMP5P22003 454 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 TMEM33P57088 247 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 DLK1P80370 383 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 OR5I1Q13606 314 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 C3AR1Q16581 482 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 FAM58AQ8N1B3 248 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 OR5C1Q8NGR4 320 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 DYRK2Q92630 601 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 GALMQ96C23 342 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 UCN2Q96RP3 112 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 FAM173AQ9BQD7 235 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 PCOLCE2Q9UKZ9 415 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 NPTNQ9Y639 398 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 ARID2Q68CP9 1835 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 C3orf85A0A1B0GTC6 90 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 CEACAM6P40199 344 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 HNRNPA3P51991 378 aaKnown RBP7.11□□□□□ -1.27
UBE4B-202ENST00000343090 SCAND1P57086 179 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 ZNF90Q03938 601 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 MS4A10Q96PG2 267 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 TAAR9Q96RI9 348 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 RGPD4Q7Z3J3 1758 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 C5orf67F2Z3F1 127 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 ZNHIT1O43257 154 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 SPRY3O43610 288 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 OR7C2O60412 319 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 IGHV4-34P06331 123 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 KIR3DL2P43630 455 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 KRTDAPP60985 99 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 ZNF718Q3SXZ3 478 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 SLC22A18ASQ8N1D0 253 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 OR10X1Q8NGY0 326 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 SARAFQ96BY9 339 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 TECTBQ96PL2 329 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 SOSTQ9BQB4 213 aa7.11□□□□□ -1.27
UBE4B-202ENST00000343090 ALX4Q9H161 411 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms