RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ZNF764Q96H86 408 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-202ENST00000342494 PCGF1Q9BSM1 259 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 WDR13Q9H1Z4 485 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 SFT2D2O95562 160 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
UBE3B-202ENST00000342494 ZBTB37Q5TC79 503 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 TMPRSS5Q9H3S3 457 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 GLDNQ6ZMI3 551 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-202ENST00000342494 FLRT3Q9NZU0 649 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 ADRB1P08588 477 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 NAAAQ02083 359 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 GPR137Q96N19 417 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 HOXD4P09016 255 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-202ENST00000342494 GALP22466 123 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 HOXA4Q00056 320 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-202ENST00000342494 OR1B1Q8NGR6 318 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 R3HDM4Q96D70 268 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 MTFP1Q9UDX5 166 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 NKX2-8O15522 239 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 HMGA2P52926 109 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 INSL4Q14641 139 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 C9orf40Q8IXQ3 194 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 OR5C1Q8NGR4 320 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 LRRC3BQ96PB8 259 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
UBE3B-202ENST00000342494 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 TRIM77I1YAP6 450 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 NDUFB6O95139 128 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 SCAND1P57086 179 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 C10orf90Q96M02 699 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 TMEM38BQ9NVV0 291 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 TRDCB7Z8K6 153 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 J3QT63 122 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 BCL3P20749 454 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 PTTG1IPP53801 180 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 MRM2Q9UI43 246 aaKnown RBP13.21□□□□□ -0.29
UBE3B-202ENST00000342494 CES1P1Q9UKY3 287 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 DNPH1O43598 174 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 MMP7P09237 267 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-202ENST00000342494 OR5AC1P0C628 307 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 ZNF385DQ9H6B1 395 aa13.21□□□□□ -0.29
UBE3B-202ENST00000342494 HSBP1O75506 76 aa13.21□□□□□ -0.3
UBE3B-202ENST00000342494 KCNMB1Q16558 191 aa13.21□□□□□ -0.3
UBE3B-202ENST00000342494 DGAT2L7PQ6IED9 249 aa13.21□□□□□ -0.3
UBE3B-202ENST00000342494 C17orf47Q8NEP4 570 aa13.21□□□□□ -0.3
UBE3B-202ENST00000342494 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 LIAT1Q6ZQX7 453 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 CCDC190Q86UF4 302 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 MDP1Q86V88 176 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 ZNF501Q96CX3 271 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-202ENST00000342494 C10orf35Q96D05 121 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 SLC52A3Q9NQ40 469 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 HTN1P15515 57 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 RAB5AP20339 215 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
UBE3B-202ENST00000342494 MYPOPQ86VE0 399 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-202ENST00000342494 ATP5SQ99766 215 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 ABHD14AQ9BUJ0 271 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 LSMEM1Q8N8F7 131 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 USP54Q70EL1 1684 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 PPIAL4EA0A075B759 164 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 PPIAL4DF5H284 164 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 FOXS1O43638 330 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 PPIAL4FP0DN26 164 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 PMELP40967 661 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 GGNBP1Q5YKI7 109 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 LILRB1Q8NHL6 650 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-202ENST00000342494 SH2D2AQ9NP31 389 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 PPIAL4AQ9Y536 164 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
UBE3B-202ENST00000342494 GYPAP02724 150 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 SP9P0CG40 484 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 OR8D4Q8NGM9 314 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
UBE3B-202ENST00000342494 IGHV3OR15-7A0A075B7D8 119 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 CST4P01036 141 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 CCDC144NLQ6NUI1 221 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 FAHD2BQ6P2I3 314 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 FAHD2AQ96GK7 314 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 FAM24AA6NFZ4 105 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 GNG4P50150 75 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 C21orf58P58505 322 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 HLXQ14774 488 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 FLYWCH2Q96CP2 140 aaKnown RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 NOL4LQ96MY1 436 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 GEMIN2O14893 280 aaKnown RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 CDC34P49427 236 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 ECSCRQ19T08 205 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 DOLPP1Q86YN1 238 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 C2CD4CQ8TF44 421 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 NUDT16L1Q9BRJ7 211 aaKnown RBP13.19□□□□□ -0.3
UBE3B-202ENST00000342494 DDA1Q9BW61 102 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 A0A1W2PPC1 479 aa13.19□□□□□ -0.3
UBE3B-202ENST00000342494 MAP1LC3B2A6NCE7 125 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms