RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 DDOQ99489 341 aa3.16□□□□□ -1.9
SYNE1-201ENST00000341594 OR5V1Q9UGF6 321 aa3.16□□□□□ -1.9
SYNE1-201ENST00000341594 EP300Q09472 2414 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 CDRT15L2A8MXV6 281 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 GFRA2O00451 464 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM225BP0DP42 221 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 HOXA5P20719 270 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF137PP52743 207 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 SLC25A42Q86VD7 318 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ARIH2OSQ8N7S6 290 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 MARCH11A6NNE9 402 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 PLCXD2Q0VAA5 305 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 C14orf144Q96I85 54 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 AQP10Q96PS8 301 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 HES7Q9BYE0 225 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 OR10A5Q9H207 317 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 METTL7AQ9H8H3 244 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TOMM40LQ969M1 308 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 RCE1Q9Y256 329 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 UBE2J1Q9Y385 318 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM269A0A1B0GVZ9 245 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 A0A1W2PPC1 479 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 GPR31O00270 319 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 DEGS1O15121 323 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 IAH1Q2TAA2 248 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TMEM177Q53S58 311 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 VAX1Q5SQQ9 334 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 LAIR1Q6GTX8 287 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF322Q6U7Q0 402 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 RS1O15537 224 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TBX6O95947 436 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 PF4P02776 101 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 RPS4Y1P22090 263 aaKnown RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ECH1Q13011 328 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 UNQ6494/PRO21346Q6UXR6 183 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ZNRF4Q8WWF5 429 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ELOVL3Q9HB03 270 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 NUDT3O95989 172 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TIMP2P16035 220 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 UCP1P25874 307 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ZP2Q05996 745 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 RGNQ15493 299 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 H1FOOQ8IZA3 346 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 OR2G3Q8NGZ4 309 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 IL1F10Q8WWZ1 152 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 HTN1P15515 57 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 METAP1P53582 386 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 TAS2R38P59533 333 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 OR5A2Q8NGI9 324 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 ZNF681Q96N22 645 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 RPUSD3Q6P087 351 aaKnown RBP3.15□□□□□ -1.9
SYNE1-201ENST00000341594 SLC35F2Q8IXU6 374 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 IKZF5Q9H5V7 419 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 B3GAT1Q9P2W7 334 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 HILPDAQ9Y5L2 63 aa3.15□□□□□ -1.9
SYNE1-201ENST00000341594 COL4A2P08572 1712 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 DSCR3O14972 297 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 WDR1O75083 606 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 OR5AL1P0C617 328 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 FCARP24071 287 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 LILRA4P59901 499 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 HBA1P69905 142 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 CRMP1Q14194 572 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 SERINC5Q86VE9 423 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 OR10C1Q96KK4 312 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 HEXA-AS1Q9H8Q6 139 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 APMAPQ9HDC9 416 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 BDP1A6H8Y1 2624 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 PLPP1O14494 284 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 XRCC2O43543 280 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 GPR32O75388 356 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 BAXQ07812 192 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 FBLN7Q53RD9 439 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 GKN2Q86XP6 184 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.15□□□□□ -1.91
SYNE1-201ENST00000341594 PRDM13Q9H4Q3 707 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 SERINC4A6NH21 518 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 MT-ND6P03923 174 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF44P15621 663 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 MYADMQ96S97 322 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 PKMYT1Q99640 499 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ANKRD30BLA7E2S9 258 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 HLA-AP01891 365 aaKnown RBP3.15□□□□□ -1.91
SYNE1-201ENST00000341594 SRP14P37108 136 aaKnown RBP3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF816Q0VGE8 651 aaPredicted RBP3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ZXDCQ2QGD7 858 aaPredicted RBP3.15□□□□□ -1.91
SYNE1-201ENST00000341594 PISDQ9UG56 409 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 NSG2Q9Y328 171 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 A0A1W2PNR3 127 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 TEX29Q8N6K0 151 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 MCHR1Q99705 422 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 NMNAT2Q9BZQ4 307 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF716A6NP11 495 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 GREM1O60565 184 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF735P0CB33 412 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 AGAP20933 346 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 G6PCP35575 357 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 SLC35A1P78382 337 aa3.15□□□□□ -1.91
SYNE1-201ENST00000341594 PRDX1Q06830 199 aaKnown RBP3.15□□□□□ -1.91
SYNE1-201ENST00000341594 MGAT2Q10469 447 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms