RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 ATG4DQ86TL0 474 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-203ENST00000340552 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
LIMK2-203ENST00000340552 OR2AJ1Q8NGZ0 328 aa13.4□□□□□ -0.26
LIMK2-203ENST00000340552 RNASE8Q8TDE3 154 aaKnown RBP13.4□□□□□ -0.26
LIMK2-203ENST00000340552 ZNF524Q96C55 264 aa13.4□□□□□ -0.26
LIMK2-203ENST00000340552 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
LIMK2-203ENST00000340552 SRD5A3Q9H8P0 318 aa13.4□□□□□ -0.26
LIMK2-203ENST00000340552 PCNX3Q9H6A9 2034 aa13.4□□□□□ -0.26
LIMK2-203ENST00000340552 ASCC3Q8N3C0 2202 aaKnown RBP13.4□□□□□ -0.26
LIMK2-203ENST00000340552 C17orf105B2RV13 164 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 MPZL1O95297 269 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 CD55P08174 381 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 CT45A8P0DMV1 189 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 CT45A9P0DMV2 189 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 ALDH3B1P43353 468 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 SNU13P55769 128 aaKnown RBP13.39□□□□□ -0.27
LIMK2-203ENST00000340552 ARFRP1Q13795 201 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 CT45A2Q5DJT8 189 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 WDR25Q64LD2 544 aaPredicted RBP13.39□□□□□ -0.27
LIMK2-203ENST00000340552 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 KMT5CQ86Y97 462 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 OR52N5Q8NH56 324 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 REEP6Q96HR9 211 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 PNO1Q9NRX1 252 aaKnown RBP13.39□□□□□ -0.27
LIMK2-203ENST00000340552 FGF21Q9NSA1 209 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 FER1L5A0AVI2 2057 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 VPS13AQ96RL7 3174 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 CDC14CA4D256 554 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 SERINC4A6NH21 518 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 SIAH2O43255 324 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 MMP9P14780 707 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 GALNSP34059 522 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 RPL23AP62750 156 aaKnown RBP13.39□□□□□ -0.27
LIMK2-203ENST00000340552 TAF9Q16594 264 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 HLA-BQ31612 363 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 GUSBP11Q6P575 273 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 SAP25Q8TEE9 199 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 ADAMTS9Q9P2N4 1935 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 TECTAO75443 2155 aa13.39□□□□□ -0.27
LIMK2-203ENST00000340552 OPN1MWP04001 364 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 OPN1MW2P0DN77 364 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 OPN1MW3P0DN78 364 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 CTLA4P16410 223 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 PDLIM4P50479 330 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 C1orf189Q5VU69 101 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 TSLPQ969D9 159 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 TMEM18Q96B42 140 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 ZNF501Q96CX3 271 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-203ENST00000340552 MRGPRX4Q96LA9 322 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 FBLN5Q9UBX5 448 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 GUSBP08236 651 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 SP6Q3SY56 376 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 CDCP2Q5VXM1 449 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 GLIPR1L1Q6UWM5 242 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 CPEB3Q8NE35 698 aaKnown RBP13.38□□□□□ -0.27
LIMK2-203ENST00000340552 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 PTPMT1Q8WUK0 201 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-203ENST00000340552 KIAA2026Q5HYC2 2103 aa13.38□□□□□ -0.27
LIMK2-203ENST00000340552 CRYM-AS1A6NIL9 109 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 CLPSP04118 112 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 CFIP05156 583 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 JMJD7P0C870 316 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 FBLP22087 321 aaKnown RBP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 RAB11AP62491 216 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 FOXK1P85037 733 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 OR5I1Q13606 314 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 ZNF66Q6ZN08 573 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 SULF2Q8IWU5 870 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 SLC26A10Q8NG04 563 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 IL6RP08887 468 aaPredicted RBP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 DBHP09172 617 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 ZNF93P35789 620 aaPredicted RBP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 EWSR1Q01844 656 aaKnown RBP eCLIP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 BCORP1Q8N888 145 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 KLHDC3Q9BQ90 382 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 OR51B6Q9H340 312 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 CALHM2Q9HA72 323 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 FKBP11Q9NYL4 201 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 LY6G6EA0A0G2JKS1 128 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 A0A1B0GX78 115 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 PRSS37A4D1T9 235 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 PRKNO60260 465 aaPredicted RBP13.37□□□□□ -0.27
LIMK2-203ENST00000340552 TAS2R46P59540 309 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 WBP2NLQ6ICG8 309 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 LYZL2Q7Z4W2 148 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 TMEM123Q8N131 208 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 ZNF321PQ8N8H1 164 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 OR5L2Q8NGL0 311 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 U3KQA8 63 aa13.37□□□□□ -0.27
LIMK2-203ENST00000340552 CPAMD8Q8IZJ3 1885 aa13.36□□□□□ -0.27
LIMK2-203ENST00000340552 IGKV3D-11A0A0A0MRZ8 115 aa13.36□□□□□ -0.27
LIMK2-203ENST00000340552 FAM230AA0A1W2PPH8 454 aa13.36□□□□□ -0.27
LIMK2-203ENST00000340552 CRTAPO75718 401 aaPredicted RBP13.36□□□□□ -0.27
LIMK2-203ENST00000340552 HPRT1P00492 218 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms