RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TAS2R19P59542 299 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SWI5Q1ZZU3 235 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR52W1Q6IF63 320 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 Q6P435 159 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FIP1L1Q6UN15 594 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 BOLLQ8N9W6 283 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TMEM229BQ8NBD8 167 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CMSS1Q9BQ75 279 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OCSTAMPQ9BR26 566 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ST6GALNAC5Q9BVH7 336 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MMP28Q9H239 520 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MS4A5Q9H3V2 200 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MCUBQ9NWR8 336 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TREM2Q9NZC2 230 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 NLKQ9UBE8 527 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF230Q9UIE0 474 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 KMT2BQ9UMN6 2715 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TRAV24A0A0B4J272 114 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SRRM5B3KS81 715 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CFHR2P36980 270 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MRPS15P82914 257 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF146Q15072 292 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SPIN3Q5JUX0 258 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SFRP4Q6FHJ7 346 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MEX3BQ6ZN04 569 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 BPIFB2Q8N4F0 458 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SUMF2Q8NBJ7 301 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR4D10Q8NGI6 311 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR4C16Q8NGL9 310 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MAFIPQ8WZ33 124 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RDH5Q92781 318 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DECR2Q9NUI1 292 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF701Q9NV72 531 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAM221AA4D161 298 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SIRPB1O00241 398 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SH2D1BO14796 132 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR2H2O95918 312 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TNFRSF1AP19438 455 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GIFP27352 417 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SLC6A1P30531 599 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CBX5P45973 191 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CEBPDP49716 269 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CCR6P51684 374 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SMIM21Q3B7S5 101 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SNAPC3Q92966 411 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IFT22Q9H7X7 185 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAIMQ9NVQ4 179 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RNF7Q9UBF6 113 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ANAPC10Q9UM13 185 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PPP1R3CQ9UQK1 317 aa12.42□□□□□ -0.42
CDK5RAP3-201ENST00000338399 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 H3BUI4 141 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 M0QYG6 137 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RAB3DO95716 219 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HAND1O96004 215 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 LHBP01229 141 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 NAT1P18440 290 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAUP35544 74 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SNRPD2P62316 118 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TESK1Q15569 626 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HOGA1Q86XE5 327 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TGIF2LYQ8IUE0 185 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DUSP18Q8NEJ0 188 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR5T2Q8NGG2 359 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DPCDQ9BVM2 203 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 EGLN1Q9GZT9 426 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SAP30LQ9HAJ7 183 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RASL12Q9NYN1 266 aa12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF107Q9UII5 783 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-201ENST00000338399 A0A1W2PPR1 153 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SLC33A1O00400 549 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 KNG1P01042 644 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TFF1P04155 84 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SRSF1Q07955 248 aaKnown RBP eCLIP12.4□□□□□ -0.424e-7■■□□□ 14.4
CDK5RAP3-201ENST00000338399 PLA1AQ53H76 456 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAM201AQ5SY85 155 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR11L1Q8NGX0 322 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR56B4Q8NH76 319 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 Q8TCH9 128 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DEDD2Q8WXF8 326 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CACNG6Q9BXT2 260 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DPAGT1Q9H3H5 408 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DNAJB11Q9UBS4 358 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GLS2Q9UI32 602 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IGHV3OR15-7A0A075B7D8 119 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RFPL4AA6NLU0 287 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RFPL4AL1F8VTS6 287 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms