RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ZNF195O14628 629 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 BCL2P10415 239 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 DYNLT3P51808 116 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 BCORP1Q8N888 145 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 BEND2Q8NDZ0 799 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ISOC2Q96AB3 205 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 PSMG3Q9BT73 122 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ISG20L2Q9H9L3 353 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 CRYBG1Q9Y4K1 1723 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 PITX3O75364 302 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SRSF10O75494 262 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 LIM2P55344 173 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 MRPL54Q6P161 138 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SPACA9Q96E40 222 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ST6GAL2Q96JF0 529 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 MBNL1Q9NR56 388 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TAAR3PQ9P1P4 343 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 CYR61O00622 381 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SPNS3Q6ZMD2 512 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 VN1R1Q9GZP7 353 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 GAL3ST2Q9H3Q3 398 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 METTL1Q9UBP6 276 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 PTPRFP10586 1907 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 C3orf85A0A1B0GTC6 90 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ADAP1O75689 374 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 CRYBB2P43320 205 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 C16orf82Q7Z2V1 217 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF687Q8N1G0 1237 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 IL23AQ9NPF7 189 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 IL4P05112 153 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 EDN1P05305 212 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 MORN1Q5T089 497 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ABHD17CQ6PCB6 329 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 Q6ZSR9 355 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 GBGT1Q8N5D6 347 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF502Q8TBZ5 544 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 WIPI2Q9Y4P8 454 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TWIST1Q15672 202 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ACSM5Q6NUN0 579 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SLC39A5Q6ZMH5 540 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 OR1P1Q8NH06 330 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 GABRG3Q99928 467 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SLCO1C1Q9NYB5 712 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 CDS2O95674 445 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 HIST1H1DP16402 221 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ATF1P18846 271 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TNFRSF4P43489 277 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 XAF1Q6GPH4 301 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 PARS2Q7L3T8 475 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 PTOV1Q86YD1 416 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 OR5M9Q8NGP3 310 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 OR4S2Q8NH73 311 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM40Q8WWA1 233 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SPACA5Q96QH8 159 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 C12orf49Q9H741 205 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 FOLR2P14207 255 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 AGBL5Q8NDL9 886 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 MRPL16Q9NX20 251 aaKnown RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 SCN7AQ01118 1682 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 CTXND1A0A1B0GTU2 59 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HINT1P49773 126 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RAB32Q13637 225 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF77Q15935 545 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 IZUMO4Q1ZYL8 232 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 TXNDC17Q9BRA2 123 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 FBXO4Q9UKT5 387 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CES1P1Q9UKY3 287 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF749O43361 778 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SMIM13P0DJ93 91 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 PWWP2BQ6NUJ5 590 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 YRDCQ86U90 279 aaKnown RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ALS2Q96Q42 1657 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 A0A1B0GX78 115 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 FAHP16930 419 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 C19orf54Q5BKX5 351 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 Q5PR19 223 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 FNDC7Q5VTL7 733 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ALKBH7Q9BT30 221 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 FOXJ2Q9P0K8 574 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RGPD3A6NKT7 1758 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RGPD4Q7Z3J3 1758 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HLA-DRB1P01911 266 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RUNX3Q13761 415 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 TEX30Q5JUR7 227 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RNF133Q8WVZ7 376 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ALG14Q96F25 216 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MRAP2Q96G30 205 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 THOC3Q96J01 351 aaKnown RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 IL36GQ9NZH8 169 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HRO43593 1189 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 NKAIN2Q5VXU1 208 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MRGPREQ86SM8 312 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MARCH3Q86UD3 253 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SGMS2Q8NHU3 365 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 OTOSQ8NHW6 89 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 OR2V2Q96R30 315 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 TREM2Q9NZC2 230 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 OPN4Q9UHM6 478 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SSC5DA1L4H1 1573 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms