RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SLC35G3Q8N808 338 aa10.65□□□□□ -0.7
VPS33B-201ENST00000333371 IMMP1LQ96LU5 166 aa10.65□□□□□ -0.7
VPS33B-201ENST00000333371 PLEKHA2Q9HB19 425 aa10.65□□□□□ -0.7
VPS33B-201ENST00000333371 GPR37O15354 613 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 RGS19P49795 217 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 SSR4P51571 173 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 PPA1Q15181 289 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 RAB35Q15286 201 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 OSR2Q8N2R0 312 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 NANPQ8TBE9 248 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 SPSB1Q96BD6 273 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 C18orf12Q96KH6 178 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 RARRES2Q99969 163 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF700Q9H0M5 742 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 MAGT1Q9H0U3 335 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 RGCCQ9H4X1 137 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 C19orf12Q9NSK7 152 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 CRIM1Q9NZV1 1036 aa10.65□□□□□ -0.71
VPS33B-201ENST00000333371 KIAA2026Q5HYC2 2103 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 NSG1A0A0A6YYJ2 146 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 A0A1W2PPE2 198 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 PQLC2LA1A4F0 135 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 FAM24AA6NFZ4 105 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 HSPB6O14558 160 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 CXCL13O43927 109 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 OR7C1O76099 320 aaPredicted RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 VAMP5O95183 116 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 PTAFRP25105 342 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 ITGA3P26006 1051 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 ECI1P42126 302 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 SUCLG1P53597 346 aaKnown RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 RPS18P62269 152 aaKnown RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 C9orf135Q5VTT2 229 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 PLCXD3Q63HM9 321 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 RTL6Q6ICC9 239 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 TCEAL6Q6IPX3 200 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 OR2Y1Q8NGV0 311 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 FAM213BQ8TBF2 198 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 TCEAL3Q969E4 200 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 ARV1Q9H2C2 271 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF442Q9H7R0 627 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 HSF4Q9ULV5 492 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 EDARQ9UNE0 448 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 NBEAQ8NFP9 2946 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 A0A087WZY1 265 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 NKX2-6A6NCS4 301 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 H7C1Q1 480 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 TERTO14746 1132 aaKnown RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 GPR137BO60478 399 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 P2RY1P47900 373 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 RAB5BP61020 215 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 CCL20P78556 96 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 EIF3IQ13347 325 aaKnown RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 CNN3Q15417 329 aaKnown RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 CEACAM16Q2WEN9 425 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 RPS19BP1Q86WX3 136 aaKnown RBP10.64□□□□□ -0.71
VPS33B-201ENST00000333371 SKA3Q8IX90 412 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 GALNT14Q96FL9 552 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 RNF122Q9H9V4 155 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 TMEM38BQ9NVV0 291 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 IL36RNQ9UBH0 155 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 KPTNQ9Y664 436 aa10.64□□□□□ -0.71
VPS33B-201ENST00000333371 CDRT15L2A8MXV6 281 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 UMAD1C9J7I0 102 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 CCL2P13500 99 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 RAC1P63000 192 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 GPR137CQ8N3F9 429 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 TMEM105Q8N8V8 129 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 OR14L1PQ8NHC6 308 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 NTNG2Q96CW9 530 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 GINS3Q9BRX5 216 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 C1orf196B1AJZ1 125 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 APOC1P02654 83 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 DTYMKP23919 212 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 FKBP2P26885 142 aaKnown RBP10.63□□□□□ -0.71
VPS33B-201ENST00000333371 DUSP1P28562 367 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 B3GALT5-AS1P59052 145 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 OR2B8PP59922 312 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS33B-201ENST00000333371 SLC25A26Q70HW3 274 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 C15orf54Q8N8G6 183 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 M1APQ8TC57 530 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 C10orf35Q96D05 121 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF845Q96IR2 970 aaPredicted RBP10.63□□□□□ -0.71
VPS33B-201ENST00000333371 WNT5BQ9H1J7 359 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 BCO1Q9HAY6 547 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 LUZP4Q9P127 313 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 ASPMQ8IZT6 3477 aa10.63□□□□□ -0.71
VPS33B-201ENST00000333371 NCOR1O75376 2440 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 BORCS7-ASMTA0A0B4J1R7 106 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ATXN7O15265 892 aaPredicted RBP10.62□□□□□ -0.71
VPS33B-201ENST00000333371 ST8SIA3O43173 380 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 EDN3P14138 238 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 CCNOP22674 350 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 B2MP61769 119 aa10.62□□□□□ -0.71
VPS33B-201ENST00000333371 EIF2S3LQ2VIR3 472 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms