RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF286AQ9HBT8 521 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 GAR1Q9NY12 217 aaKnown RBP20.48■□□□□ 0.87
TSKU-201ENST00000333090 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 ZNF724A8MTY0 619 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 ZFAND5O76080 213 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 TIAF1O95411 115 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 CXCL1P09341 107 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 SNIP1Q8TAD8 396 aaKnown RBP20.47■□□□□ 0.87
TSKU-201ENST00000333090 MOB3AQ96BX8 217 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 DHHO43323 396 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 SLC34A2O95436 690 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 AADACP22760 399 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 HAAOP46952 286 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 RGS19P49795 217 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 C10orf128Q5T292 105 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 SYT13Q7L8C5 426 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 CCDC71LQ8N9Z2 235 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 TMEM171Q8WVE6 324 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 ZNF837Q96EG3 531 aaPredicted RBP20.47■□□□□ 0.87
TSKU-201ENST00000333090 BORCS8Q96FH0 119 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 MAGT1Q9H0U3 335 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 LOC102725191A0A1B0GVB3 256 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 PIAS2O75928 621 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 DLK1P80370 383 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 ELOBQ15370 118 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 TREM2Q9NZC2 230 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 SLC7A11Q9UPY5 501 aa20.47■□□□□ 0.87
TSKU-201ENST00000333090 IGLV3-12A0A075B6K2 115 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 HSD17B6O14756 317 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 SSSCA1O60232 199 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 NKX2-1P43699 371 aaPredicted RBP20.46■□□□□ 0.87
TSKU-201ENST00000333090 Q6ZSR3 168 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 CYB561D1Q8N8Q1 229 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 ZNF610Q8N9Z0 462 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 UCN2Q96RP3 112 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 NPIPA2E9PIF3 369 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 NPIPA3F8WFD2 350 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 SRP19P09132 144 aaKnown RBP20.46■□□□□ 0.87
TSKU-201ENST00000333090 RBP2P50120 134 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 ZNF429Q86V71 674 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 ZNF383Q8NA42 475 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 KIAA1456Q9P272 454 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 ST3GAL6Q9Y274 331 aa20.46■□□□□ 0.87
TSKU-201ENST00000333090 IGKV1-12A0A0C4DH73 117 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 CCDC163A0A0D9SF12 145 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 C3orf85A0A1B0GTC6 90 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 SLC33A1O00400 549 aaPredicted RBP20.45■□□□□ 0.86
TSKU-201ENST00000333090 IGKV1D-12P01611 117 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 ERVFRD-1P60508 538 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 OR5C1Q8NGR4 320 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 ATXN7O15265 892 aaPredicted RBP20.45■□□□□ 0.86
TSKU-201ENST00000333090 CNN3Q15417 329 aaKnown RBP20.45■□□□□ 0.86
TSKU-201ENST00000333090 SPNS3Q6ZMD2 512 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 TMEM217Q8N7C4 229 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 TMEM54Q969K7 222 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 SPACA9Q96E40 222 aaPredicted RBP20.45■□□□□ 0.86
TSKU-201ENST00000333090 RASL10BQ96S79 203 aa20.45■□□□□ 0.86
TSKU-201ENST00000333090 NOSIPQ9Y314 301 aaKnown RBP20.45■□□□□ 0.86
TSKU-201ENST00000333090 TNRC18O15417 2968 aaPredicted RBP20.45■□□□□ 0.86
TSKU-201ENST00000333090 TGIF2-C20orf24A0A0A6YYL0 155 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 PITX3O75364 302 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 CST7O76096 145 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 CD63P08962 238 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 NXPH1P58417 271 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 HIST1H3AP68431 136 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 PDZD11Q5EBL8 140 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 HIST2H3PS2Q5TEC6 136 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 OSR2Q8N2R0 312 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 ULBP2Q9BZM5 246 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 BCO1Q9HAY6 547 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 SEMA5BQ9P283 1151 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 MPPED1O15442 326 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 HSPA12AO43301 675 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 GLB1P16278 677 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 BATF2Q8N1L9 274 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 OR10D4PQ8NGN7 298 aa20.44■□□□□ 0.86
TSKU-201ENST00000333090 EML6Q6ZMW3 1958 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 CDS2O95674 445 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 LY86O95711 162 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 PPYP01298 95 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 H3F3AP84243 136 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 RUNX1Q01196 453 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 Q6ZPA2 131 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 P4HA3Q7Z4N8 544 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 TMEM252Q8N6L7 170 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 PARPBPQ9NWS1 579 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 UBE2J1Q9Y385 318 aaPredicted RBP20.43■□□□□ 0.86
TSKU-201ENST00000333090 WSB1Q9Y6I7 421 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 LCATP04180 440 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 UCP3P55916 312 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 DEFA6Q01524 100 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 KMT5CQ86Y97 462 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 NIPSNAP3BQ9BS92 247 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 DEFB126Q9BYW3 111 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 C11orf1Q9H5F2 150 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 ZNF442Q9H7R0 627 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 PLEKHF2Q9H8W4 249 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 GLRX2Q9NS18 164 aa20.43■□□□□ 0.86
TSKU-201ENST00000333090 BTBD17A6NE02 478 aa20.42■□□□□ 0.86
TSKU-201ENST00000333090 TRDCB7Z8K6 153 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms