RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 NRN1LQ496H8 165 aa19.48■□□□□ 0.71
HOXD1-201ENST00000331462 PLCXD3Q63HM9 321 aa19.48■□□□□ 0.71
HOXD1-201ENST00000331462 OR2V1Q8NHB1 315 aa19.48■□□□□ 0.71
HOXD1-201ENST00000331462 OR14L1PQ8NHC6 308 aa19.48■□□□□ 0.71
HOXD1-201ENST00000331462 SFT2D1Q8WV19 159 aa19.48■□□□□ 0.71
HOXD1-201ENST00000331462 ATPIF1Q9UII2 106 aa19.48■□□□□ 0.71
HOXD1-201ENST00000331462 A0A1B0GW64 132 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 FAM221AA4D161 298 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 PHF1O43189 567 aaPredicted RBP19.47■□□□□ 0.71
HOXD1-201ENST00000331462 NME2P1O60361 137 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 PPYP01298 95 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 P04436 131 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 PATE4P0C8F1 98 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 CCL4P13236 92 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 HOXA6P31267 233 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 CAMLGP49069 296 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 CEACAM16Q2WEN9 425 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 CLEC9AQ6UXN8 241 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 OR11L1Q8NGX0 322 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 PRDM14Q9GZV8 571 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 GPR35Q9HC97 309 aa19.47■□□□□ 0.71
HOXD1-201ENST00000331462 RCL1Q9Y2P8 373 aaKnown RBP19.47■□□□□ 0.71
HOXD1-201ENST00000331462 MRPS18CQ9Y3D5 142 aaKnown RBP19.47■□□□□ 0.71
HOXD1-201ENST00000331462 LRRC3CA6NJW4 275 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 CXCL13O43927 109 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 IGHEP01854 428 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 MMP7P09237 267 aaPredicted RBP19.46■□□□□ 0.71
HOXD1-201ENST00000331462 PTAFRP25105 342 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 ZNF616Q08AN1 781 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 BRICD5Q6PL45 260 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 SLC35G3Q8N808 338 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 FGFBP3Q8TAT2 258 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 HIST1H2BAQ96A08 127 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 C14orf79Q96F83 325 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 BOD1Q96IK1 185 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 CLCC1Q96S66 551 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 C1QTNF5Q9BXJ0 243 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 PCP4L1A6NKN8 68 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 EDN3P14138 238 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 LFNGQ8NES3 379 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 OR10D3Q8NH80 312 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 ABHD14BQ96IU4 210 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 TAAR9Q96RI9 348 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 TP53RKQ96S44 253 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 PARPBPQ9NWS1 579 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 SIT1Q9Y3P8 196 aa19.46■□□□□ 0.71
HOXD1-201ENST00000331462 MPPED1O15442 326 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 MT-ND4LP03901 98 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 RND3P61587 244 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 AWAT1Q58HT5 328 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 COLCA1Q6ZS62 124 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 TMEM45BQ96B21 275 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 IER2Q9BTL4 223 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 PARP12Q9H0J9 701 aaKnown RBP19.45■□□□□ 0.7
HOXD1-201ENST00000331462 TMEM222Q9H0R3 208 aa19.45■□□□□ 0.7
HOXD1-201ENST00000331462 C3orf85A0A1B0GTC6 90 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 TRDCB7Z8K6 153 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 K7N7A8 449 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 HOXB1P14653 301 aaPredicted RBP19.44■□□□□ 0.7
HOXD1-201ENST00000331462 MEOX2P50222 304 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 S100A12P80511 92 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 GNMTQ14749 295 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 ETV3LQ6ZN32 361 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 CALHM1Q8IU99 346 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 ZNF611Q8N823 705 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 C2CD4CQ8TF44 421 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 SLC39A7Q92504 469 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 PIGCQ92535 297 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 TMEM56Q96MV1 263 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 SH3BGRL3Q9H299 93 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 ZNF442Q9H7R0 627 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 FAM86C1Q9NVL1 165 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 TMEM56-RWDD3S4R434 201 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 RPL36A-HNRNPH2H7BZ11 118 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 CYTIPO60759 359 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 EWSR1Q01844 656 aaKnown RBP eCLIP19.44■□□□□ 0.7
HOXD1-201ENST00000331462 NHLH2Q02577 135 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 SNIP1Q8TAD8 396 aaKnown RBP19.44■□□□□ 0.7
HOXD1-201ENST00000331462 PBDC1Q9BVG4 233 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 SMDT1Q9H4I9 107 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 RPS10P5Q9NQ39 176 aa19.44■□□□□ 0.7
HOXD1-201ENST00000331462 C7orf77A4D0Y5 90 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 PRSS44E7EML9 344 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 ZFP82Q8N141 532 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 SPIN2AQ99865 258 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 SPIN2BQ9BPZ2 258 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 C1orf196B1AJZ1 125 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 ZNF587BE7ETH6 402 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 FHITP49789 147 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 CLDN15P56746 228 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 SAXO1Q8IYX7 474 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 OR2C3Q8N628 320 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 OR8G5Q8NG78 346 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 CDX2Q99626 313 aaPredicted RBP19.43■□□□□ 0.7
HOXD1-201ENST00000331462 USB1Q9BQ65 265 aaKnown RBP19.43■□□□□ 0.7
HOXD1-201ENST00000331462 SPACA1Q9HBV2 294 aa19.43■□□□□ 0.7
HOXD1-201ENST00000331462 ARID1AO14497 2285 aa19.42■□□□□ 0.7
HOXD1-201ENST00000331462 DUXBA0A1W2PPF3 345 aa19.42■□□□□ 0.7
HOXD1-201ENST00000331462 PITX3O75364 302 aa19.42■□□□□ 0.7
HOXD1-201ENST00000331462 OR7C1O76099 320 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms