RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 JOSD1Q15040 202 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 PHLDA2Q53GA4 152 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 TCEAL6Q6IPX3 200 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 CARFQ8N187 725 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 OR2C3Q8N628 320 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 OR5L1Q8NGL2 311 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 OR4D5Q8NGN0 318 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 MSI2Q96DH6 328 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 NUDT22Q9BRQ3 303 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 NDUFAF3Q9BU61 184 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 DUSP23Q9BVJ7 150 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 CABIN1Q9Y6J0 2220 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 A0A087WZY1 265 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 IGSF23A1L1A6 192 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 B4DEV8 164 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 ZNF205O95201 554 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 DBHP09172 617 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 PI4KAP42356 2102 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 OR1D4P47884 311 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 SLC16A14Q7RTX9 510 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 LGI3Q8N145 548 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 CLDND2Q8NHS1 167 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 LIN37Q96GY3 246 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 NOL4LQ96MY1 436 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 RBM14Q96PK6 669 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 MRPL37Q9BZE1 423 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 ELL3Q9HB65 397 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 PLEKHJ1Q9NW61 149 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 PITPNC1Q9UKF7 332 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 NXT1Q9UKK6 140 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 A0A1B0GWJ7 208 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 DVL1O14640 695 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 NUTF2P61970 127 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 CFHR1Q03591 330 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 HLA-BQ31612 363 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 RAB24Q969Q5 203 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 C11orf1Q9H5F2 150 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 NECAP2Q9NVZ3 263 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 WASF3Q9UPY6 502 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 PCNX3Q9H6A9 2034 aa15.75■□□□□ 0.11
CLSTN3-202ENST00000331148 GZMBP10144 247 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 FUT3P21217 361 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 CDAP32320 146 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 ARL4DP49703 201 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 RND2P52198 227 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 CASP6P55212 293 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 FXYD4P59646 89 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 GABREP78334 506 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 EIF3IQ13347 325 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 SAP25Q8TEE9 199 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 TMEM171Q8WVE6 324 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 MRPL13Q9BYD1 178 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 WWTR1Q9GZV5 400 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 FSCN3Q9NQT6 498 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 SLC2A9Q9NRM0 540 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 C5orf63A6NC05 138 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 E9PLN8 166 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 M0R296 226 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 RER1O15258 196 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 ZNF133P52736 654 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 ZNF664Q8N3J9 261 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 ZNF283Q8N7M2 679 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 TMEM105Q8N8V8 129 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 TMEM234Q8WY98 164 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 PNRC2Q9NPJ4 139 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 MMACHCQ9Y4U1 282 aa15.74■□□□□ 0.11
CLSTN3-202ENST00000331148 IGKV3D-11A0A0A0MRZ8 115 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 ZNF850A8MQ14 1090 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 GEMIN2O14893 280 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 CFIP05156 583 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 FCGR2AP12318 317 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 RPL23AP62750 156 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 THEM4Q5T1C6 240 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 CDCP2Q5VXM1 449 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 TMEM183AQ8IXX5 376 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 RNASEH2CQ8TDP1 164 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 RBMXL1Q96E39 390 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 SERINC1Q9NRX5 453 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 OMGP23515 440 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 RRADP55042 308 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 PEAR1Q5VY43 1037 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 WDR74Q6RFH5 385 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 C5orf24Q7Z6I8 188 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 BEND2Q8NDZ0 799 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 GPR87Q9BY21 358 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 SLC7A11Q9UPY5 501 aa15.73■□□□□ 0.11
CLSTN3-202ENST00000331148 CLDN34H7C241 214 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 HSPA12AO43301 675 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 OPRM1P35372 400 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 CD200P41217 278 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 CLRN1P58418 232 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 MFAP5Q13361 173 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 P4HA3Q7Z4N8 544 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 D2HGDHQ8N465 521 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 SLC35G3Q8N808 338 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 OR10G4Q8NGN3 311 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 POM121Q96HA1 1249 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 LYZL4Q96KX0 146 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 TMEM242Q9NWH2 141 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms