RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 IKZF1Q13422 519 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 TMEM128Q5BJH2 165 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 PLK3Q9H4B4 646 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 TMEM100Q9NV29 134 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 TINAGQ9UJW2 476 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 FZR1Q9UM11 496 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 ZNF835Q9Y2P0 537 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 PRRG2O14669 202 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 DUS4LO95620 317 aaKnown RBP14.42□□□□□ -0.1
DDX41-201ENST00000330503 PPP3CBP16298 524 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 HLA-GP17693 338 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 VAMP1P23763 118 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 FABP6P51161 128 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 ZNF83P51522 516 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 ERVK11-1P61568 191 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 SUPT4H1P63272 117 aaKnown RBP14.42□□□□□ -0.1
DDX41-201ENST00000330503 NAAAQ02083 359 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 SRSF4Q08170 494 aaKnown RBP14.42□□□□□ -0.1
DDX41-201ENST00000330503 OR8G1Q15617 311 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 C11orf88Q6PI97 169 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 SLC22A25Q6T423 547 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 GFRALQ6UXV0 394 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 UNQ6126/PRO20091Q6UXV3 157 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 CASTOR1Q8WTX7 329 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 TMPRSS13Q9BYE2 586 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 DECR2Q9NUI1 292 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 NECAP2Q9NVZ3 263 aa14.42□□□□□ -0.1
DDX41-201ENST00000330503 A0A0G2JNJ9 132 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 TPD52L2O43399 206 aaKnown RBP14.41□□□□□ -0.1
DDX41-201ENST00000330503 ZNF205O95201 554 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 NAPSAO96009 420 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 FAM27E3Q08E93 113 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 ZNF154Q13106 437 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 SURF2Q15527 256 aaPredicted RBP14.41□□□□□ -0.1
DDX41-201ENST00000330503 ZNF718Q3SXZ3 478 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 Q6ZR03 302 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 LINC00596Q86U02 117 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 OR5M8Q8NGP6 311 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 ZNF286AQ9HBT8 521 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 ASF1BQ9NVP2 202 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 Q9UFV3 132 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 TRAV24A0A0B4J272 114 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 IGHV3-64DA0A0J9YX35 117 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 CCSO14618 274 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 SFT2D2O95562 160 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 RPS2P15880 293 aaKnown RBP14.41□□□□□ -0.1
DDX41-201ENST00000330503 IL13RA2Q14627 380 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 MSMPQ1L6U9 139 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 MBNL2Q5VZF2 373 aaKnown RBP14.41□□□□□ -0.1
DDX41-201ENST00000330503 Q6P435 159 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 C22orf34Q6ZV56 151 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 C5orf24Q7Z6I8 188 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 C11orf53Q8IXP5 236 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 SUMF2Q8NBJ7 301 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 PHB2Q99623 299 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 WDR13Q9H1Z4 485 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 SLC23A1Q9UHI7 598 aa14.41□□□□□ -0.1
DDX41-201ENST00000330503 DBX1A6NMT0 343 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 CDIPTO14735 213 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 RGS11O94810 467 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 GRPP07492 148 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 BMP5P22003 454 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 ALKBH2Q6NS38 261 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 CLEC18BQ6UXF7 455 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 Q6ZS49 121 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 ASB13Q8WXK3 278 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 HEXA-AS1Q9H8Q6 139 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 RHOFQ9HBH0 211 aa14.4□□□□□ -0.1
DDX41-201ENST00000330503 MCRIP1C9JLW8 97 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 M0R1B8 84 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 PGA5P0DJD9 388 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 PGAM2P15259 253 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 SSTR2P30874 369 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 KCTD9Q7L273 389 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 NRIP2Q9BQI9 281 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 IFT22Q9H7X7 185 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 CHMP1AQ9HD42 196 aaPredicted RBP14.39□□□□□ -0.11
DDX41-201ENST00000330503 Q9N2K0 584 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 ZGRF1Q86YA3 2104 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 HEATR1Q9H583 2144 aaKnown RBP14.39□□□□□ -0.11
DDX41-201ENST00000330503 MAP1BP46821 2468 aaKnown RBP14.39□□□□□ -0.11
DDX41-201ENST00000330503 TMEM210A6NLX4 147 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 HSPB6O14558 160 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 HS3ST1O14792 307 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 TIMM8AO60220 97 aaPredicted RBP14.39□□□□□ -0.11
DDX41-201ENST00000330503 CXCL2P19875 107 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 SRSF7Q16629 238 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX41-201ENST00000330503 C3orf36Q3SXR2 165 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 SLC7A5P1Q8MH63 180 aa14.39□□□□□ -0.11
DDX41-201ENST00000330503 TRAV14DV4A0A0A6YYC5 116 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 A0A1B0GWJ7 208 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 TSC22D2O75157 780 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 CD8AP01732 235 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 GCH1P30793 250 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 ECI1P42126 302 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 UCNP55089 124 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 SLC9A3R2Q15599 337 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 IGSF11Q5DX21 431 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 LPCAT3Q6P1A2 487 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 C1orf174Q8IYL3 243 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms