RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 C11orf42Q8N5U0 333 aa7.32□□□□□ -1.24
SKA2-201ENST00000330137 SPPL3Q8TCT6 385 aa7.32□□□□□ -1.24
SKA2-201ENST00000330137 ADAMTS18Q8TE60 1221 aa7.32□□□□□ -1.24
SKA2-201ENST00000330137 GABRG3Q99928 467 aa7.32□□□□□ -1.24
SKA2-201ENST00000330137 ANXA10Q9UJ72 324 aa7.32□□□□□ -1.24
SKA2-201ENST00000330137 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
SKA2-201ENST00000330137 TRBV23OR9-2A0A075B6M9 112 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 A6NNC1 897 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ZNF878C9JN71 531 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 TPPP2P59282 170 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ZP4Q12836 540 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 C16orf82Q7Z2V1 217 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 MARCH3Q86UD3 253 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR5T1Q8NG75 326 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR51T1Q8NGJ9 327 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 PINX1Q96BK5 328 aaKnown RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 TP53RKQ96S44 253 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR51I2Q9H344 312 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 PHPT1Q9NRX4 125 aaPredicted RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 B3GAT1Q9P2W7 334 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 SLC45A2Q9UMX9 530 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 SCDO00767 359 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 CISD3P0C7P0 127 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 NPBWR2P48146 333 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 PTTG1IPP53801 180 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 POM121L1PQ3SYA9 428 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 LYZL2Q7Z4W2 148 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 SPRED2Q7Z698 418 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 PRSS58Q8IYP2 241 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 DEFB123Q8N688 67 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 SLC38A9Q8NBW4 561 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR4N2Q8NGD1 307 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR4C3Q8NH37 302 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 HSPB7Q9UBY9 170 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 HEATR5AQ86XA9 2040 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TRPM6Q9BX84 2022 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 IGSF23A1L1A6 192 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ZNF705FA8MVS1 300 aaPredicted RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 F6UZH7 168 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 MSTNO14793 375 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 XRCC2O43543 280 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 LMX1BO60663 402 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 NXPH2O95156 264 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 DIRAS3O95661 229 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 PCCBP05166 539 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ZNF705DP0CH99 300 aaPredicted RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 ZNF705BP0CI00 300 aaPredicted RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 SELEP16581 610 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ID2Q02363 134 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 FUT7Q11130 342 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TRA2AQ13595 282 aaKnown RBP eCLIP7.31□□□□□ -1.24
SKA2-201ENST00000330137 ENDOGQ14249 297 aaKnown RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 LY6G5CQ5SRR4 150 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TPTE2P1Q5T6R2 138 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ZNF787Q6DD87 383 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 POMZP3Q6PJE2 187 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 PIP4P2Q8N4L2 257 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TET1Q8NFU7 2136 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 OR52M1Q8NGK5 317 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 RERGQ96A58 199 aaPredicted RBP7.31□□□□□ -1.24
SKA2-201ENST00000330137 C10orf35Q96D05 121 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TMEM56Q96MV1 263 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 LRRC3BQ96PB8 259 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 ABHD14AQ9BUJ0 271 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 VAMP8Q9BV40 100 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 SERINC1Q9NRX5 453 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 LRIT1Q9P2V4 623 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 SLC17A4Q9Y2C5 497 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 TMEM56-RWDD3S4R434 201 aa7.31□□□□□ -1.24
SKA2-201ENST00000330137 CPAMD8Q8IZJ3 1885 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 A0A1B0GV50 99 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 A6NCN8 305 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 KLF8O95600 359 aaPredicted RBP7.3□□□□□ -1.24
SKA2-201ENST00000330137 IL33O95760 270 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 IFNA5P01569 189 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 HLA-HP01893 362 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 ZNF16P17020 682 aaPredicted RBP7.3□□□□□ -1.24
SKA2-201ENST00000330137 GJA4P35212 333 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 MPLP40238 635 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 DEFB103AP81534 67 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 FOXL1Q12952 345 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 COL9A2Q14055 689 aaPredicted RBP7.3□□□□□ -1.24
SKA2-201ENST00000330137 TCEAL5Q5H9L2 206 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.3□□□□□ -1.24
SKA2-201ENST00000330137 DOK3Q7L591 496 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 ZNF761Q86XN6 746 aaPredicted RBP7.3□□□□□ -1.24
SKA2-201ENST00000330137 C20orf196Q8IYI0 205 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 IL22RA1Q8N6P7 574 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 OR5C1Q8NGR4 320 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 FLVCR1-AS1Q8TAF5 88 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 RNASE8Q8TDE3 154 aaKnown RBP7.3□□□□□ -1.24
SKA2-201ENST00000330137 TMEM171Q8WVE6 324 aa7.3□□□□□ -1.24
SKA2-201ENST00000330137 IL22RA2Q969J5 263 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms